Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01047 ATGCAGCTCCCTTTGTTAGTCAAATATCAATTAGCAGCAATCATCTTCATTATAATATCCCTAACCAAAGTTACCTGCTTATCTTTCAATTTCTCTACCTTCGAAAGAAAGGATGAAGATCATTTATTGCTGAACAACAATTCAAAGATATTCTCATCAGCCATCCAAGTGACCCCAGATACGCGTGCACAATCAATACATAATTATTCTGGACGTGCTTTCTACAACAAGCCATACAAACTTTGGAGCCAGAAGAAGAACCAAACTGCTTCCTTCAACACCACTTTTGTGCTCAACATCGACCCCCAAACTACCCCTGCAGGTGGAGAAGGCTTGGCCTTCATCTTAACTTCAGATACCAATCTCCCAGAAAACAGTTCAGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAAGCTGGGATTCTAGCAGTGGAGTTTGACACAAGAAACAGTTTCTCACAAGATGGCCCTGACAACCATGTTGGCATCAACATAAACAGCATCAATTCCATCAAACAGGCTCCATTAATCAACACTCGGGTCAACCTTTCATCAGGTGAACATGTCAAAATTCACATTCAGTACTTCAATGACACATTATCAGTTTTTGGTGCCATGGATGGAGCTTCAGAAGAATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATTTATCTAACTATCTTCAAGAAGAGGTTTACCTTGGTTTCTCAGCCTCAACAAGTAACTACACGCAGCTGAACTGTGTAAGATCATGGGAATTCAGTGGTGTTGATATTGCTGATGATGATAATAAAAGCCTCTTGTGGGTTTATATCACTGTTCCGATAGTGATTGTTATCATCATCATAGGAGGAATGGTGGTCTTTTTCTTGTATTGGCAAAGGAAGCGCCATATGGAAATGCCAGAAGATGCATATCCCAGGATAGAGGACCAAATTCAATATTCCTCTATGGCTCCAAAGAAGTTTGAGCTAAGGAAAATAACAAAAGCAACAGGTGAATTCAGCCCTCAAAACAAGCTTGGAGAAGGTGGATTCGGAACTGTGTACAAGGGGCTATTGGACAATAAAGAGGTAGCTGTGAAGAGAGTCTCTAAGAACTCACGCCAAGGGAAGCAAGAATTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCACAGGAATTTGGTGAAACTCACGGGTTGGTGCTATGAGAAAAGAGAGCTTCTCCTTGTGTATGAGTTCATGCCTAAAGGAAGCCTAGACAATTACCTCTTTGGTGACAAAATTTTTGGTAACAACACCCTTGAAGAGGGGTGTTCTTCAACACTGACTTGGGAAACAAGGCACAGTGTGATTCATGGTGTGGCTCAAGCATTAGACTATCTCCACAATGGGTGTGAAAAGAGGGTTCTTCACAGAGACATCAAGGCCAGCAACATAATGTTGGACTCAGACTACAATGCCAAGTTGGGAGACTTTGGATTGGCAAGAACCATTCAGCAGAGAAATGAAACACACCACTCTACAAAGGAGATTGCAGGGACACCAGGGTACATGGCTCCAGAGACCTTTCTCACAGGAAGAGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAGGTTGTGTGTGGAAGGAGGCCAGGGAGTGTGTATGCACAAGATGACTACAAAAACAGCATTGTGTATTGGGTTTGGGACTTATATGGGAAGGAGAAAGTAGTTGGTGCTGTGGATGCAAGGCTGAAGAAGGAGGAGATTAAAGAGGAAGAAGTGGAGTGTGTTCTTGTTCTTGGCTTGGCGTGTTGCCATCCAAACCCACACCATAGGCCATCCATGAGAACTGTTCTTCAGGTTCTGAATGGGGAAGCACCCCCACCTGAGGTGCCTATGGAAAGACCAGTTTTCATGTGGCCTGCTATGCCTCCATCATTCAAAGAAGCTGAAGATAACTCCCTCATCCAGGCGCGCAACCTTTTCGCTTTCTCTCTCTTGTTGGGCAGCACACTTCGCTCCTTCACTACTCATAATTTCAAAATCCCTAAAACACTCACCCTAATCCATCATTTACGCTCCATTCTCCTCAAATCTATACCAACAATCGGAAAAATCGTCAACAACAACCAATCCGCCCCCTACGGCACCACGTCGCGCGCCCTATGCCGCAACCTCACCTCCGAGATGCTCCACCCCTCATGCGTCAGCTCGGAGTTTGGGTTGAACGCACTTTATGACTCCGTGAATGGCGGAGGTGATGTTTGGATTAACGAAAACTGCTTCCGCATCGTGCGCCAGCTCGGAGAAGGTGGCTTCGCCTAG 2331 0.4466 MQLPLLVKYQLAAIIFIIISLTKVTCLSFNFSTFERKDEDHLLLNNNSKIFSSAIQVTPDTRAQSIHNYSGRAFYNKPYKLWSQKKNQTASFNTTFVLNIDPQTTPAGGEGLAFILTSDTNLPENSSGEWLGIVNATSNGTSQAGILAVEFDTRNSFSQDGPDNHVGININSINSIKQAPLINTRVNLSSGEHVKIHIQYFNDTLSVFGAMDGASEESMETLLVSPPLNLSNYLQEEVYLGFSASTSNYTQLNCVRSWEFSGVDIADDDNKSLLWVYITVPIVIVIIIIGGMVVFFLYWQRKRHMEMPEDAYPRIEDQIQYSSMAPKKFELRKITKATGEFSPQNKLGEGGFGTVYKGLLDNKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYEKRELLLVYEFMPKGSLDNYLFGDKIFGNNTLEEGCSSTLTWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGSVYAQDDYKNSIVYWVWDLYGKEKVVGAVDARLKKEEIKEEEVECVLVLGLACCHPNPHHRPSMRTVLQVLNGEAPPPEVPMERPVFMWPAMPPSFKEAEDNSLIQARNLFAFSLLLGSTLRSFTTHNFKIPKTLTLIHHLRSILLKSIPTIGKIVNNNQSAPYGTTSRALCRNLTSEMLHPSCVSSEFGLNALYDSVNGGGDVWINENCFRIVRQLGEGGFA 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01047 776 Gene3D Phosphorylase Kinase; domain 1 326 415 - -
Gma09g01047 776 ProSitePatterns Protein kinases ATP-binding region signature. 347 368 IPR017441 GO:0005524
Gma09g01047 776 ProSiteProfiles Protein kinase domain profile. 341 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01047 776 Gene3D Transferase(Phosphotransferase) domain 1 416 643 - -
Gma09g01047 776 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 13 662 - -
Gma09g01047 776 SMART serkin_6 341 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01047 776 Pfam Protein kinase domain 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01047 776 SUPERFAMILY Protein kinase-like (PK-like) 322 624 IPR011009 -
Gma09g01047 776 CDD STKc_IRAK 347 626 - -
Gma09g01047 776 PANTHER - 13 662 - -
Gma09g01047 776 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 277 IPR013320 -
Gma09g01047 776 Gene3D - 25 273 - -
Gma09g01047 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gma09g01047 776 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Gma09g01047 776 Pfam Legume lectin domain 27 272 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01047 Gma-Chr9 21681907 21685294 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01047 70 639 Receptor kinase-like Gene Family AT5G10530 40.986 2.35e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma09g01047 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01047 - - gmx:100790353 1289.63