Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01035 ATGGAGCTGGCTTTGAGTTTAGGAGACACGTCCAAGTCCTTTACATTTCTCGACAAGGCGGTGACTTTACCCCCCAACAAGGACCCACCTGGGTTCTGCTTGGCGCCGAGTTTCGCCGAGAAAAGAAGCGATTCTGAGAGAGGAACCGCTTCTGGTTCTTCAGATCCACCGGTTCAGCTCGACCTTCTTCCTTTCTCTCCGGTTCTCAGACCCCAACAACATCCTCCCTCTCACCTTCGGATCCCTTGGCTCACCCAAGCATGTGGTGGAGCGGCGAGGGTTCTGGACGTGAACCTATTTCCCGCGGCCACCGCGGAGGATGGCGACGACGGCACGTCGCTGTCGTCGTCGCCGAACAGCGCGGTGTCGCCGTTTCAGATGGATTTCTGCACCAGGAACGGTAATGCGGCGGAGTTCGGAAGCAGAAACAAGAGAGAGCAGCAAGAGGCTGAGGGTAGAGCGAGTGATGACGATGAAAATGGCTCCACGAGGAAGAAACTTAGACTCTCCAAAGAACAATCAGCTTTTCTCGAAGAAAGTTTCAAAGAACACACCACTCTCAATCCCAAGCAAAAACTTGCTTTGGCTAAACAGTTGAATCTCCGTCCTCGTCAAGTGGAGGTTTGGTTTCAGAACAGAAGGGCCAGGACAAAGTTGAAGCAAACAGAAGTGGATTGTGAGTATTTGAAGAGATGCTGTGAGACCCTAACAGAAGAGAATAGGAGGTTGCAAAAGGAACTTCAAGAACTCAGAGCCCTAAAATCTTCTCAACCTTTCTACATGCAGCTTCCAGCCACCACTCTCACCATGTGCCCCTCTTGTGAAAGGGTAGCCACAAATTCCACCACAACCAACCAAACTTCTATAGTTAACAACAATGCTTCTTCTCAAATCCCAGTGGAATTGTCTCTAAGCAAGCCCAGAATATTGCCCTTCCCTAATGGCCAGGTCCAAGCCCAAGCCCATCAAATAGCCTCTTCATGA 984 0.5061 MELALSLGDTSKSFTFLDKAVTLPPNKDPPGFCLAPSFAEKRSDSERGTASGSSDPPVQLDLLPFSPVLRPQQHPPSHLRIPWLTQACGGAARVLDVNLFPAATAEDGDDGTSLSSSPNSAVSPFQMDFCTRNGNAAEFGSRNKREQQEAEGRASDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSSQPFYMQLPATTLTMCPSCERVATNSTTTNQTSIVNNNASSQIPVELSLSKPRILPFPNGQVQAQAHQIASS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01035 327 Coils Coil 226 256 - -
Gma09g01035 327 MobiDBLite consensus disorder prediction 142 169 - -
Gma09g01035 327 SMART halz 220 263 IPR003106 GO:0006355|GO:0043565
Gma09g01035 327 ProSiteProfiles 'Homeobox' domain profile. 160 220 IPR001356 GO:0003677
Gma09g01035 327 MobiDBLite consensus disorder prediction 109 141 - -
Gma09g01035 327 MobiDBLite consensus disorder prediction 105 169 - -
Gma09g01035 327 SUPERFAMILY Homeodomain-like 161 229 IPR009057 -
Gma09g01035 327 Gene3D - 168 218 - -
Gma09g01035 327 CDD homeodomain 164 221 IPR001356 GO:0003677
Gma09g01035 327 Pfam Homeobox associated leucine zipper 220 254 IPR003106 GO:0006355|GO:0043565
Gma09g01035 327 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 322 - -
Gma09g01035 327 ProSitePatterns 'Homeobox' domain signature. 195 218 IPR017970 GO:0000981|GO:0006355
Gma09g01035 327 Pfam Homeodomain 164 218 IPR001356 GO:0003677
Gma09g01035 327 SMART HOX_1 162 224 IPR001356 GO:0003677
Gma09g01035 327 PANTHER - 1 322 - -
Gma09g01035 327 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01035 Gma-Chr9 21239477 21241837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01035 156 314 Homeobox Transcription Factor Family AT4G37790 66.875 5.74e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma09g01035 Homeodomain 2.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01035 K09338 - gmx:100776113 637.876