Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01026 ATGTTGTGTTGTGGAGGTGCAGAAGAGGATTTTGGCATTCCACCTGGAAATCAATATAATGCATCACCTAAAAAGGGTAATGCATATAATGGTGGAGGAGGAGGTGACAGAGGCGAGCCTAGGGGTAATGTTGTAAAAAATGGTGCTCCACAAAAAACATTGCCAATTGAGATACCCGCTATTTCATTGGATGAGTTAGATCGATTAACAAGCAACTTTAGTACAGAGGCTTTGATAGGAGAAGGTTCTTATGGGAAGGTTTACTATGCAAAATTGAGCGACGGTATGGAAGCTGCAATCAAGAAGCTGGATACAAGTTCTTCCCCAGACCCTGACTCTGATTTTGCAGCACAATTATCAATTGTTTCAAGATTGAAGAATGAGCATTTTGTGGAGTTGATGGGGTATTGTCTTGAGGAAAATTATAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTGTTACACGGAAGAAAAGGAGTGCAAGGTGCTGAACCTGGTCCAATTTTAAATTGGAGTCAAAGAATAAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGTGTCAACCTTCTATAGTTCATCGCGATGTTAGATCTAGCAATGTCTTACTCTTCAATGACTATGAGTCCAAGGTTGCAGATTTCAACTTGACAAATCAATCTTCTGACACTGCAGCACGACTACATTCAACAAGAGTCTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGCCAAATAACCCAAAAAAGCGATGTTTATAGTTTTGGAGTTGTGCTTTTGGAACTTTTAACAGGAAGAAAGCCAGTAGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTCACTTGGGCAACTCCAAGATTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAACTAAACAATGAATACCCACCCAAGGCAATTGCTAAGTTAGCAGCAGTTGCAGCACTTTGTGTACAATATGAAGCTGACTTTAGGCCAAACATGACTATTGTTGTCAAAGCTCTTCAACCACTTCTTAATTCAAAACCGACTAGTGTTGATCCAGACACTTGA 1101 0.3987 MLCCGGAEEDFGIPPGNQYNASPKKGNAYNGGGGGDRGEPRGNVVKNGAPQKTLPIEIPAISLDELDRLTSNFSTEALIGEGSYGKVYYAKLSDGMEAAIKKLDTSSSPDPDSDFAAQLSIVSRLKNEHFVELMGYCLEENYRILVYQYASLGSLHDVLHGRKGVQGAEPGPILNWSQRIKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFNDYESKVADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPTSVDPDT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01026 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 364 - -
Gma09g01026 366 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
Gma09g01026 366 Gene3D Transferase(Phosphotransferase) domain 1 151 363 - -
Gma09g01026 366 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Gma09g01026 366 PANTHER OS03G0226300 PROTEIN 1 364 - -
Gma09g01026 366 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g01026 366 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672|GO:0006468
Gma09g01026 366 MobiDBLite consensus disorder prediction 13 49 - -
Gma09g01026 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Gma09g01026 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Gma09g01026 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01026 Gma-Chr9 20989892 20992662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01026 61 354 Trihelix Transcription Factor Family AT5G38560 45.667 1.96e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gma09g01026 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01026 - - gmx:100777194 696.427