Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01024 ATGAGCGGAGTGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGATAAGATTATGGACATTGCTTCTCTGGAGAAGTTCCTTCGGGATAGGATTAAGGTCGGTGACAAGGCCAGTGCACTTGGCGATTCCATTACCATCACCAGGGACAAGAGCAAGATCACCGTCACCTCTGACAACAACTTCTCTAAACGGTGCTCTCTTCGCCATGCTCCTCTTCTACAAGCTTTAGGATTTATTGAAACCCCGTATATCGATCTTGATAATCCTTTGGCCAAGGAATTAATGGAAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCAGGACACCATAAGATGAGTAGGTGTGCTGGTACATTTGTAACAAATTTTGTTGAATGTAATTTCTGTAGGATACCTATTACTGATTATCATCGATGCTGTCCAAGTTGCTCATATGATTTGTGCCTTAATTGCTGTCGAGATCTTCGAGAAGCCACTGCAGATCACAATAAAGAACCTCAAACAGAACAAGCAAAAATTTCTGATCGAAATATATTAAGTAAATTTCTGCATTGGAGATCCAATGACAATGGAAGTATTCCATGTCCCCCTAAGGAGTATGGTGGCTGTGGTTATTCTTCATTAAATTTAAGCCCAATTTTCAAGATGAACTGGGTTGCAAAGTTGGTAAAAAATGTAGAGGAAATGGTTAGTGGCTGCAGAATTAGTAATGTTGATGGTCCACTGGAAACTGGGCTGAATGATCTCAGACTTTGCCAATACTCTCATAGAGAAGCCAGTAATGATAATTATCTTTATTGTCCAGCATTTGACGATATCAAAACTGATGGGATTGGCAGTTTTAGAAAGCATTGGAAAACTAGTGAGCCCATTATTGTTAAGCAAGTATTTGATGGGTCATCCATTTTAAGCTGGGATCCAATGGTCATATGGAGAGACATTCTAGAGACAACATATGGGAAAGCAAAAGATGAAAACGGGATGGTTAAGGCCATAGATTGCTTAGATGGGTCTGAGGTTGATATTGAGCTTGCTCAGTTCATGAAAGGATACTTCAAAGGGCATATTCTTGAAAATGGTTGGCCACAGTTATTGAAATTGAAAGATTGGCCTTCACCTAGCGCTTCTGAAGAATTTCTACTGTACCAAAGACCCGAGTTTATCAGCAAACTACCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTTTCAATGTTGTAGCTAAATTTCCTCATTACTCCTTGCAGAATGACGTAGGACCCAAGATATATATATCTTATGGGATTAGTGATGAACTTGGTAGAGGTGATTCAGTGACAAATCTCCACTTCAATATGCGTGACATGGTGTACCTTTTGGTTCATACAAATGAAGTAAAGCTGAAGAACTGGCAGATAACTAAAATTGAAATGATGCAAAAAGATAAAGCTAATAAGGAATCAGAGGCAAAAGAATCAGGGATCCTCAAATATCTTCAAGGGGGAGTTCACCTTATTCCTTACTTGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAGCCCAATCCCAAGAATTTATTCGAACACTACAGTGTTATTATAACAACACATATTTAGATGGTGATAAGCAAAAAGCAATTAACTTACTCTTGGGGCATTTTCAACCCCAACAAGGAAATCCAGCACTATGGGAGGTAGATTCGGATCAGCATTACACTGTCAAGAAACATGGTTTTAAGCATGAGCAGATTGGGCGGTGCAGCGGCGGTGGCACCCCTTGTTGCCGAGATTTAAAGGATTTTAATATTTATAGAAAATGTAATAAAGACCTTGGGAATGTATACAAGGCTTTAGGGATGCCTCAAGAAGCTATTGCATGTTATCAGCGTGCTTTTTAG 1923 0.4041 MSGVKGKKKGASFVIDCAKPVEDKIMDIASLEKFLRDRIKVGDKASALGDSITITRDKSKITVTSDNNFSKRCSLRHAPLLQALGFIETPYIDLDNPLAKELMEVYESMGDTLAFQYGGSAGHHKMSRCAGTFVTNFVECNFCRIPITDYHRCCPSCSYDLCLNCCRDLREATADHNKEPQTEQAKISDRNILSKFLHWRSNDNGSIPCPPKEYGGCGYSSLNLSPIFKMNWVAKLVKNVEEMVSGCRISNVDGPLETGLNDLRLCQYSHREASNDNYLYCPAFDDIKTDGIGSFRKHWKTSEPIIVKQVFDGSSILSWDPMVIWRDILETTYGKAKDENGMVKAIDCLDGSEVDIELAQFMKGYFKGHILENGWPQLLKLKDWPSPSASEEFLLYQRPEFISKLPLLQYIHSKWGLFNVVAKFPHYSLQNDVGPKIYISYGISDELGRGDSVTNLHFNMRDMVYLLVHTNEVKLKNWQITKIEMMQKDKANKESEAKESGILKYLQGGVHLIPYLIFSERRGQWKAAAQSQEFIRTLQCYYNNTYLDGDKQKAINLLLGHFQPQQGNPALWEVDSDQHYTVKKHGFKHEQIGRCSGGGTPCCRDLKDFNIYRKCNKDLGNVYKALGMPQEAIACYQRAF 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01024 640 Pfam Ribosomal L22e protein family 9 72 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gma09g01024 640 Gene3D - 2 112 IPR038526 -
Gma09g01024 640 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 138 497 IPR045109 GO:0032454|GO:0033169
Gma09g01024 640 SUPERFAMILY Clavaminate synthase-like 296 469 - -
Gma09g01024 640 Gene3D Cupin 276 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01024 Gma-Chr9 20886348 20892093 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01024 5 72 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 79.412 8.84e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01024 K15601 - gmx:100792166 712.22