Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01019 ATGAGCGGAGTGAAGGGGAAGAAGAAGGCAGCGAGCTTCGTGATCGATTGCGCGAAGCTGGTGGAGGATAAGATTATGGACATTGTTTCTCTGGAGAAGTTCCTTCAGGATAGGATTAAGGTTGGTGACAAGGCCGGTGCACTTGGCGATTCCATTACCGTCACCAGGGACAAGAGCAAGATCATCGTCACCTCCGACAGCAACTTCTCTAAACGGTACTCTCTTCGCCATGCTCCTCTTCTACAAGCTTTAGGATTTATTGAAACCCCGTATATCAATCTTGATAACCCTTTGGCCATGGAATTAATGGAAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAATAAGATTCGGATACGCGAGATACCTGTTCTTGATAAGTTACAGTATCTCCACGTGCTGCTGTCCTCGGTGCTTCCGGTGATAAAGCAGATCCGCCGTGAACAGTGTTTTCAAGTAGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCTGAGGATAAAATTGAACACAGATGAGCAGATGTGCTGTAATTTCTGTAGGATACCTATTACTGATTATCATTGA 600 0.4533 MSGVKGKKKAASFVIDCAKLVEDKIMDIVSLEKFLQDRIKVGDKAGALGDSITVTRDKSKIIVTSDSNFSKRYSLRHAPLLQALGFIETPYINLDNPLAMELMEVYESMGDTLAFQYGGSAAHNKIRIREIPVLDKLQYLHVLLSSVLPVIKQIRREQCFQVELEKKLRGAEIDLLRIKLNTDEQMCCNFCRIPITDYH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01019 199 PANTHER RIBOSOMAL L22E FAMILY PROTEIN 2 86 - -
Gma09g01019 199 Pfam Ribosomal L22e protein family 8 73 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gma09g01019 199 Gene3D - 2 117 IPR038526 -
Gma09g01019 199 PANTHER 60S RIBOSOMAL PROTEIN L22 2 86 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01019 Gma-Chr9 20761382 20762947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01019 4 72 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 73.913 2.25e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01019 K15601 - gmx:100792166 145.591