Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00998 ATGCAGGAAAGAGAACTAGCATTGAGGTCGTTCAAGACTGGAAACACACCAATTCTAGTGGCAACAGATGTTGCAGCGCGTGGTCTTGACATCCCACGGGTAGCACATGTGGTAAATTTTGATCTTCCAAATGACATTGACGATTATGTGCACCGGATAGGAAGAACGGGACGAGCTGGTAAAATGGGATTAGCAACGGCCTTCTTCAACGAAGGTAATTTGAACTTGGCTAAATCATTGGCTGATTTGATGCAAGAGGCAAATCAAGAAGTACCTGCCTGGCTCAGCCGATATGCAGCAAGGGCTATTTACAGTGGTGGCAACAGAAATAGGAAGTCTGGGGGATCTCGTTTTGGTGGCCGCGATTTTAGGAAAGAGGGTTCGTTTAATAAAGCAACGGATTACTATGGCAGTGGAACTGGTGGTGGATATGGTGGCAATTATGGTGGAGGGTATGGTCAAGGTGTGACAAGTGCTTGGGATTAG 486 0.465 MQERELALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLNLAKSLADLMQEANQEVPAWLSRYAARAIYSGGNRNRKSGGSRFGGRDFRKEGSFNKATDYYGSGTGGGYGGNYGGGYGQGVTSAWD 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00998 161 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 99 IPR001650 -
Gma09g00998 161 SMART helicmild6 1 60 IPR001650 -
Gma09g00998 161 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37 2 133 - -
Gma09g00998 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 124 IPR027417 -
Gma09g00998 161 CDD SF2_C_DEAD 2 69 - -
Gma09g00998 161 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 133 - -
Gma09g00998 161 Pfam Helicase conserved C-terminal domain 2 60 IPR001650 -
Gma09g00998 161 Gene3D - 1 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00998 Gma-Chr9 19840008 19840493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00998 4 93 Eukaryotic Initiation Factors Gene Family AT1G72730 35.556 3.48e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00998 K11594 - gmx:100818326 271.166