Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00978 ATGGCCGAAATCGAAGCTACCGTTCCAGATCCCTCTCAAATCGACGTCAAACTTTTCAACCGCTGGAGCTTCGACGACGTTGAGGTTACTGATATGTCTCTGGCTGATTACATTGGAGTGTCCCCGTCAAAGCATGCTACATATGTTCCTCACACTGCTGGTAGGTACTCAGTGAAGAGGTTCAGGAAGGCGCAGTGCCCCATTGTTGAGAGACTCACCAACTCTCTCATGATGCACGGAAGGAACAATGGAAAGAAGCTCATGGCTGTCAGGATTATCAAGCATGCAATGGAAATTATTCACTTGCTCACTGACCTGAACCCAATTCAGGTCATTGTTGATGCCGTCATCAATAGTGGTCCCCGTGAAGATGCAACTAGAATTGGTTCTGCTGGAGTGGTGAGGAGACAGGCCGTTGATATCTCACCCCTTAGACGTGTTAATCAGGCCATCTATCTTCTAACAACAGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCAGCTAAAGGTTCATCCAACAGTTATGCTATCAAGAAAAAGGATGAAATTGAGAGAGTTGCCAAGGCTAATCGTTAA 615 0.4585 MAEIEATVPDPSQIDVKLFNRWSFDDVEVTDMSLADYIGVSPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00978 204 PANTHER 40S RIBOSOMAL PROTEIN S5 4 204 - -
Gma09g00978 204 ProSitePatterns Ribosomal protein S7 signature. 70 96 IPR020606 GO:0003723|GO:0003735|GO:0006412
Gma09g00978 204 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 204 IPR000235 GO:0006412
Gma09g00978 204 Pfam Ribosomal protein S7p/S5e 58 204 IPR023798 -
Gma09g00978 204 Gene3D Ribosomal protein S7 domain 3 204 IPR036823 -
Gma09g00978 204 PANTHER RIBOSOMAL PROTEIN S7 4 204 IPR000235 GO:0006412
Gma09g00978 204 SUPERFAMILY Ribosomal protein S7 17 204 IPR036823 -
Gma09g00978 204 TIGRFAM uS7_euk_arch: ribosomal protein uS7 16 204 IPR005716 GO:0003735|GO:0006412|GO:0015935
Gma09g00978 204 CDD uS7_Eukaryote 17 204 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00978 Gma-Chr9 19370887 19373702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00978 2 204 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 89.655 4.55e-138 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00978 K02989 - gmx:100815850 399.823