Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00934 ATGCCACCTCATTTGTTCACTGGTGGAAAGGTTGAGGGAGAACAAGGATCAGCAATCCATGTTGTGTTAATGGATCCCAACACAGGCAGTATTGTCCAAGTTGGACCAGAATCTGTTGCGAAATTGAATGTGGTGGTACTTGAAGGTGACTTTAATGAGGAAGTAGACGATGATTGGACAAGAGAGCACTTTGAAAGCCACGAAGTAAAGGAACGTGAGGGGAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTAGCCTAAAGGAAGGAGTAGGAACCTTTGGTGATCTTACTTTCACGGACAATTCTAGCTGGATAAGAAGCAGAAAATTCCGGCTTGGGGTTAAGGTGGCTTGTGGTTATTGTGAGGAGATTCGTATTCGTGAGGGAAAAACTGAAACCTTTGCTGTTAAAGATCATAGAGGAGAATTGTACAAGAAACACTACCCACCTGCTTTGCATGATGAAGTTTGGAGATTGGATCGGATAGCTAAGGATGGTGCACTTCACAAAAAATTGATTCAGGCAAAAATTGTAACTGTAGAAGATTTCCTACGTCTTCTTGTTCGTGAGCCACAGAAGTTAAGAAGTATACTTGGTAGTGGAATGTCCAATAGAATGTGGGAGAATACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGCAAGCTCTTTGTATACTACATTGATGAAACCAATAGTTCTGGCATTATGTTCAACAATATATACGAGCTGAGAGGCCTCATTTCTGATGGCCAATTTTTCTCTTTGGAATCACTTACTCCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAGAAAGCATATGAAAATTGGCACCGAGTTGTAGAATATGATGGAAAAGTTTTAAATTCTCATACTAATTTGAAAAAGGAATCAAGAGCTGTGGCCACTCAAATAATGCACCATAACAGTTTCCCTGAGCAGCAGTATACCTCAGCAAAGAACAAGGTGTCATACGTCTCCTCTGAACCAAATCAACATTTGCAAATAACAAATAACTATTCGTCCTGTCCTGGTTTGGCCGATTATCCATTTGGGAGATCCGACAATCACATGGTAGGAATGTCTTTAACTGACTCTCAAATAGCATTGCCTGGCAGCATGAATTACATGTCGGGTGAAAATCATGAAATTGGCAGTACATATTTTGCTGGAGATTGGTCCCGGCCAAGAAATGCTCAAGGTTTGGAAGACATTGTCGCAGAAGAACTTCGTCTTAGAAGTTCGGAGATGTTGGAGAGTGATGATATGCAGAGGTTACTCAAGACTATTAATGCAGGAGTGAACATGTCGACTAATCTTGGTCATTCTAACGAGGGTTGCAACACTTATAGCCTTCAATATGAGCCTCAGATGTATCATTCATTCAGCGAGGACCAGGGGAAGTCTTCGGGGAAGGCTGTTGTTGGGTGGCTTAAGCTCAAAGCTGCTTTAAGGTGGGGCATATTTATCAGGAAAAAAGCTGCAGAAAGGAGAGCACAGCTCACTGAGCTGAATTGA 1524 0.4213 MPPHLFTGGKVEGEQGSAIHVVLMDPNTGSIVQVGPESVAKLNVVVLEGDFNEEVDDDWTREHFESHEVKEREGKRPLLTGDLQVSLKEGVGTFGDLTFTDNSSWIRSRKFRLGVKVACGYCEEIRIREGKTETFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYIDETNSSGIMFNNIYELRGLISDGQFFSLESLTPNQKMSVDSLVKKAYENWHRVVEYDGKVLNSHTNLKKESRAVATQIMHHNSFPEQQYTSAKNKVSYVSSEPNQHLQITNNYSSCPGLADYPFGRSDNHMVGMSLTDSQIALPGSMNYMSGENHEIGSTYFAGDWSRPRNAQGLEDIVAEELRLRSSEMLESDDMQRLLKTINAGVNMSTNLGHSNEGCNTYSLQYEPQMYHSFSEDQGKSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00934 507 PANTHER OS02G0562300 PROTEIN 5 339 - -
Gma09g00934 507 PANTHER OS02G0562300 PROTEIN 398 506 - -
Gma09g00934 507 Pfam Calmodulin binding protein-like N-terminal domain 3 140 IPR046831 -
Gma09g00934 507 Pfam Calmodulin binding protein central domain 152 218 IPR046830 -
Gma09g00934 507 Pfam Calmodulin binding protein C-terminal domain 223 285 IPR046829 -
Gma09g00934 507 PANTHER OS02G0177800 PROTEIN 398 506 IPR012416 GO:0005516
Gma09g00934 507 PANTHER OS02G0177800 PROTEIN 5 339 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00934 Gma-Chr9 17091826 17095586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00934 1 507 Calmodulin-binding Proteins AT2G24300 62.451 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00934 - - gmx:100808358 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00934 09 17091826 17095586 Gma09g00934 09 17091826 17095586 ECH