Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00918 ATGACATGGCCTATTCGAATGCAAATTGCCATAGAGACAACTATTGCATTGGCCTATCTCCATACTTCTAACATCATCCACCGTGATGTCAAAACCAACAACATTGTACTTGACATTAATGTTTCGGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGCCATGTCTCCATAGCTCCACAAGGGTTTCTGGGGTATCTTGACCCTCAATATTTCCAATTCTACAGGCTCACGGACAAGAGTGATGTGTATAGCTTTGGGGTTGTACTTATTAAGCTGATATCATCCATGCCGGCAGTTGATGCAGCCAGGGAAAGAGATGAAGTTAACTTGGCAAATCTTTCCATGAAAAAGATTCAAAAAGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTTGGGTTTGAGTCAAACCAAGTAGTTAAAAGGATGCTAACTTCAGTAGCAGGGTTGGCCTTTCGGTGTGTGCAAAGAGACAATGAATTAAGGCCTTCTATGGATGAAGTTCTGGAAGCTCTCAATAAATTATGA 543 0.4144 MTWPIRMQIAIETTIALAYLHTSNIIHRDVKTNNIVLDINVSVKVADFGLSRLLPNDVSHVSIAPQGFLGYLDPQYFQFYRLTDKSDVYSFGVVLIKLISSMPAVDAARERDEVNLANLSMKKIQKGKLSELVDPSFGFESNQVVKRMLTSVAGLAFRCVQRDNELRPSMDEVLEALNKL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00918 180 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00918 180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Gma09g00918 180 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 179 IPR044652 -
Gma09g00918 180 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 179 - -
Gma09g00918 180 Pfam Protein kinase domain 8 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00918 180 Coils Coil 170 180 - -
Gma09g00918 180 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
Gma09g00918 180 SUPERFAMILY Protein kinase-like (PK-like) 1 175 IPR011009 -
Gma09g00918 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00918 Gma-Chr9 15636402 15636944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00918 1 177 Receptor kinase-like Gene Family AT1G25390 61.017 1.98e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma09g00918 Pkinase 8.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00918 - - gmx:100788638 313.538