Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00917 ATGGTTTCAGTCACATGGCAAGTGCTCATTGTTGCAGTTCTTGCTATAGTGGCCTCAAAATATGATCAGGGCTATTATCAAGCCTCTGGTAGAGAAATTATACAGATCAATGGAACTACTAAAGCTCTTATGAATTTTACAACTGAGACATCACTTGGTGGAATTACTATCAGAGCTTTCAACATGGCTAACAGATTTTTCAAAACCTACCTTAATCTTGTTGACGCAAGTGCCACACTGTTCTTTCATTCCAATGCTGCTATCAAACGGTTATTTCTAAGGATTAAATTAATTCACAATTTGATACTCTTCATTGCAGCTTTGCTACTTGTTCTACTTCCAAAGGGATATGTGGCCCCTGGGCTAAAAGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGCAGTATTCAAAAGAACTTGGACCCTCTATGTCTATACTCTGATTATGAAATATGGAAGGTGAAACATGATGACACTAGTGGAACCAAACGGTCTCAAGAGTGCACATTCTGTAAAAGAGGCTTGACAAATGCTCAGGCTTCAGGGGGCCATATGAATATCCATAGGAATGACAGAAAGAGAGGAGATCAAGGTCTCCAAATTGGCCCAAATCATATTAATGATAACATTCATCAAGTCAAGAGAGAAAATCAGAAAGAGAGTGAATTGGACTTGGAGGTCAGACTTGGCCATGATCCATACTGA 726 0.3912 MVSVTWQVLIVAVLAIVASKYDQGYYQASGREIIQINGTTKALMNFTTETSLGGITIRAFNMANRFFKTYLNLVDASATLFFHSNAAIKRLFLRIKLIHNLILFIAALLLVLLPKGYVAPGLKDLRTKLSIIPQEPTLFKGSIQKNLDPLCLYSDYEIWKVKHDDTSGTKRSQECTFCKRGLTNAQASGGHMNIHRNDRKRGDQGLQIGPNHINDNIHQVKRENQKESELDLEVRLGHDPY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00917 241 Gene3D ABC transporter type 1, transmembrane domain 1 122 IPR036640 GO:0005524|GO:0016021
Gma09g00917 241 PANTHER BNAA01G25250D PROTEIN 1 122 - -
Gma09g00917 241 PANTHER BNAA01G25250D PROTEIN 121 162 - -
Gma09g00917 241 MobiDBLite consensus disorder prediction 188 212 - -
Gma09g00917 241 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 122 - -
Gma09g00917 241 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 121 162 - -
Gma09g00917 241 SUPERFAMILY ABC transporter transmembrane region 1 113 IPR036640 GO:0005524|GO:0016021
Gma09g00917 241 ProSitePatterns Zinc finger C2H2 type domain signature. 175 195 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00917 Gma-Chr9 15609259 15613481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00917 174 199 C2H2 Transcription Factor Family AT5G43540 88.462 1.30e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00917 - - gmx:100813711 165.236