Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00901 ATGTGTGTGAAGGACCAAGAGAAAGATATGATTGATAACACCACAACCAGTTCATGGCCTTTGCAACATTGCCACCTTTTGCTCAAGACCCACATGGACAAAGAAGGATCTTCTCTCAGAACTTCATGTGATGATGACACAACCAACAACATCAGTGTTCAAAATTCCTTTCCTCTAGAAAGCATATGCGAGGACGCAGTGGTTGCAGACAAGAAACAGAATCTGATGAATTTTGTTCTGGCTCTTCGGTCTGGAGAGTGGTCTGATATTGGAGAACGCCCTTACATGGAGGATACTCACATATGCATTGGAGATTTGGCAAAGAAGTTTAATTATGATGTACCTTTTGAGGAGGCTGTTTCTTTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTCCGTGATAATCTGCcaagagttattgttgaggatgttaactttcctttggaccttgagaaggtggtcaaaaggtcatttttggagacagatgcagcatttctaaaaacatactctcatgagccttccgtttcttctggtacaactgcaataactgcaattaTATTTGGAAGGTCCTTACTTGTAGCCAATGCTGGAGATTGCCGAGCTGTCCTGTCCCGCCATGGAAGGGCCATAGAAATGTCCAAAGATCATAGGCCAAGCTGCATCAATGAAAGGACGCGAGTTGAGTCCCTAGGCGGCTTCGTTGATGATGGTTACTTGAACGGCCAGTTAGGTGTTACTCGTGCTCTTGGAGACTGGCACCTTGAAGGAATGAAGGAAATGAGTGATAGAGAAGGACCACTGAGTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGAATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGAAGGAAGCTTCAAGAGCACAATGATGAGAAACAATGCTGCAAGGAAATAGTACAGGAAGCAACCAAGAGAGGATCAACAGATAACTTAACAGTTGTGATGGTGTGTTTTAACTTTGATCCTCCACCACCTGTGGTTGTGGAAAGAACACGAGTAAGAAGAAGCATTTCTGCTGAGGGACTTCAGAATCTTAACTGGCTGTTAAAAGAATAA 1146 0.3735 MCVKDQEKDMIDNTTTSSWPLQHCHLLLKTHMDKEGSSLRTSCDDDTTNNISVQNSFPLESICEDAVVADKKQNLMNFVLALRSGEWSDIGERPYMEDTHICIGDLAKKFNYDVPFEEAVSFYGVFDGHGGKSAAQFVRDNLPRVIVEDVNFPLDLEKVVKRSFLETDAAFLKTYSHEPSVSSGTTAITAIIFGRSLLVANAGDCRAVLSRHGRAIEMSKDHRPSCINERTRVESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEMSDREGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFSSQNAVDFARRKLQEHNDEKQCCKEIVQEATKRGSTDNLTVVMVCFNFDPPPPVVVERTRVRRSISAEGLQNLNWLLKE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00901 381 Pfam Protein phosphatase 2C 95 340 IPR001932 -
Gma09g00901 381 ProSiteProfiles PPM-type phosphatase domain profile. 83 348 IPR001932 -
Gma09g00901 381 SUPERFAMILY PP2C-like 75 349 IPR036457 -
Gma09g00901 381 SMART PP2C_SIG_2 98 348 IPR001932 -
Gma09g00901 381 Coils Coil 315 335 - -
Gma09g00901 381 PANTHER PROTEIN PHOSPHATASE 2C 1 369 IPR015655 GO:0004722|GO:0006470
Gma09g00901 381 CDD PP2Cc 83 348 IPR001932 -
Gma09g00901 381 SMART PP2C_4 73 346 IPR001932 -
Gma09g00901 381 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169
Gma09g00901 381 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 369 - -
Gma09g00901 381 Gene3D - 65 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00901 Gma-Chr9 14636525 14640741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00901 48 379 PP2C-type Phosphatase Gene Family AT2G25620 56.287 4.43e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Gma09g00901 PP2C 1.1e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00901 K14803 - gmx:121172626 756.903