Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g00899 | ATGGCTGGAATGCTTCCTGGAGTTGAATGTGCTAGAAGGAGAAGGTTTCGTCGATGTTCGGATTCAAATTCAACTTCTTTGGGATCACATGCATCCACAAGGCGTTCTTCTTTCTGTTTGTATGCTAGTAACCATGATCAATGTCGCCTTTTCTCATCCTCTTCCCTGCAAAGAAGCATGTTATACCAGGCACACCCTGATGAGAATATGGGAGGAGTGGCCAGAGAAGCCAAACAGAGATTGGATGACAAGTTCAGAGCTCAAAGGATGTCAGAAAACAAAAGGCAAAACAACACAAAATGTGTGGAGGGCAAAAGAACAAGCATAATAGTGTTGCACACAGAGGAATATGGGTCAAAGAAAAGTGGTTCAAGGAGGTTCAGTTGGACCAAATGGAGCTGGAAAGCATCAGAACAAGAGGAATGTGCTGTGTGCTTGGAATCATTCAGAGTTGGAGAGACACTGATCCATCTTCCTTGTGCCCATAGGTTCCATGACAGATGCTTGAAACCATGGTTGGAAAATAATTCTTATTGTCCATGTTGCAGAACTACCATTCTTCCCCTCTAG | 570 | 0.4368 | MAGMLPGVECARRRRFRRCSDSNSTSLGSHASTRRSSFCLYASNHDQCRLFSSSSLQRSMLYQAHPDENMGGVAREAKQRLDDKFRAQRMSENKRQNNTKCVEGKRTSIIVLHTEEYGSKKSGSRRFSWTKWSWKASEQEECAVCLESFRVGETLIHLPCAHRFHDRCLKPWLENNSYCPCCRTTILPL | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g00899 | 189 | Pfam | Ring finger domain | 141 | 183 | IPR001841 | - | |
Gma09g00899 | 189 | ProSiteProfiles | Zinc finger RING-type profile. | 142 | 183 | IPR001841 | - | |
Gma09g00899 | 189 | SMART | ring_2 | 142 | 182 | IPR001841 | - | |
Gma09g00899 | 189 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 122 | 188 | IPR013083 | - | |
Gma09g00899 | 189 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 185 | - | - | |
Gma09g00899 | 189 | SUPERFAMILY | RING/U-box | 127 | 188 | - | - | |
Gma09g00899 | 189 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 1 | 185 | - | - | |
Gma09g00899 | 189 | CDD | RING-H2_PA-TM-RING | 141 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g00899 | Gma-Chr9 | 14300763 | 14302656 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g00899 | 1 | 86 | C3H Transcription Factor Family | AT2G15580 | 46.316 | 1.89e-17 | 72.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g00899 | - | - | gmx:100527583 | 342.043 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma09g00899 | 09 | 14300763 | 14302656 | Gma09g00899 | 09 | 14300763 | 14302656 | ECH |