Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00893 ATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAATATAGTTCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCGCACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAGTGCCAGACTTTAATATCTGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTAAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGACGTGCTTTCATTTGGTATTGTCATGTGGGAACTCCTCACGGGAGAAGAGCCATATGCTGATTTGCACTATGGGGCCATCATAGGTGGTATTGTAAACAACACATTACGACCTCCAGTTCCAGAATCTTGTGATCCAGAATGGAGATTGCTGATGGAGAGGTGCTCGTCATCAGAACCATCAGAAAGACCTTCCTTCTCTGAGATTGCTAATGGATTACGTTCCATGGCAACCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTGCACTGCAAAGTCAAGTTCAGAAATGA 543 0.4586 MDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVLSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCSSSEPSERPSFSEIANGLRSMATKISPKGQNQQQQPAALQSQVQK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00893 180 PRINTS Tyrosine kinase catalytic domain signature 9 27 IPR001245 GO:0004672|GO:0006468
Gma09g00893 180 PRINTS Tyrosine kinase catalytic domain signature 80 102 IPR001245 GO:0004672|GO:0006468
Gma09g00893 180 PRINTS Tyrosine kinase catalytic domain signature 124 146 IPR001245 GO:0004672|GO:0006468
Gma09g00893 180 PANTHER SERINE-THREONINE PROTEIN KINASE 1 162 - -
Gma09g00893 180 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 1 162 - -
Gma09g00893 180 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00893 180 Pfam Protein tyrosine and serine/threonine kinase 2 151 IPR001245 GO:0004672|GO:0006468
Gma09g00893 180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 15 27 IPR008271 GO:0004672|GO:0006468
Gma09g00893 180 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
Gma09g00893 180 MobiDBLite consensus disorder prediction 157 180 - -
Gma09g00893 180 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00893 180 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00893 Gma-Chr9 14164743 14166128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00893 1 173 MAP Kinase Kinase Kinase AT3G46920 82.659 7.78e-100 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma09g00893 PK_Tyr_Ser-Thr 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00893 - - gmx:100776264 326.25