Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00879 ATGGATAACCAAAATGCCATCGAGTTCTTTGAAGGCCAAAACCTTTTGTACATGCAGATATTTGGTAACCTAAGACCTGTGTGTCTTATGTGGGCTTGCGAACTAGGTATTCCAGACATAATATCCAACCATGGGAAACCCATTACTCTTCTTGAGTTGGTCTCAGCCCTGCAAATTCCACCATCTAAGGTGGGTTTTGTGAAGCGATTCATGCGCTTTTTGGCACACAATAGAATCTTTGATATCCAGGAGAGCCAGGAAGATCATCATGAATTAGCGTATGCTCTAACTCCTGCATCAAAGCTTCTAGTCAATGACAGTATCCATTGTTTATCTCCAATGCTTCAGTTCATGACTGATCCGTTTTTAACGAATGCATACCATCACTTGGGGGAATGGATGCGCGGCGATGACCCCACATTATGTGAGACAGCCTTTGGGACAACCCTTTGGGGACTTCTTGAGAAAAAACCTTCATACAATAGTCTTTTCAATCAGGTTATGGCAAGTGATTCCCGGATGGTAGACTTGGTACTAAAAAATTGCACTTCGATTTTTGAGGAGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATTTGTGAGACATTTCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCATGTTGTAGCAAACTTGACGGGAAGCAATCGTTTAAGTTTTGTCGGAGGCGATATGTTCAAATCTATCCCTCAAGCCGATGCAGTCCTACTAAAGTGGGTTTTACATGATTGGAATGAAGAAAATTGCATAAAGATCCTCAAAAGGTGTAAAGATTCTATTTCAAGCAAAGGCAACAGAGGGAAAATAATAATCATAGATGCAGTAATAAATGAAAAGCTAGATGACCAGGATAAGACTCAAACAAAGCTCTGTATGGATATAGCTATGATGATCGCTTTTAATGGAAAAGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATTGGAGCAGGATTCCAACACTACAAAATATATCATACTTTTGGTTTTAGATCTCTTATTGAGGTCTATCCTTAA 1062 0.4021 MDNQNAIEFFEGQNLLYMQIFGNLRPVCLMWACELGIPDIISNHGKPITLLELVSALQIPPSKVGFVKRFMRFLAHNRIFDIQESQEDHHELAYALTPASKLLVNDSIHCLSPMLQFMTDPFLTNAYHHLGEWMRGDDPTLCETAFGTTLWGLLEKKPSYNSLFNQVMASDSRMVDLVLKNCTSIFEELDSIVDVGGGTGTTARIICETFPKLKCVVLDLPHVVANLTGSNRLSFVGGDMFKSIPQADAVLLKWVLHDWNEENCIKILKRCKDSISSKGNRGKIIIIDAVINEKLDDQDKTQTKLCMDIAMMIAFNGKERTEEEWKQLFIGAGFQHYKIYHTFGFRSLIEVYP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00879 353 Pfam Dimerisation domain 28 75 IPR012967 GO:0046983
Gma09g00879 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Gma09g00879 353 PANTHER O-METHYLTRANSFERASE 2 352 IPR016461 GO:0008168
Gma09g00879 353 Pfam O-methyltransferase domain 127 335 IPR001077 GO:0008171
Gma09g00879 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 352 - -
Gma09g00879 353 Gene3D Vaccinia Virus protein VP39 104 353 IPR029063 -
Gma09g00879 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 353 IPR016461 GO:0008168
Gma09g00879 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Gma09g00879 353 CDD AdoMet_MTases 192 279 - -
Gma09g00879 353 Gene3D - 1 103 IPR036388 -
Gma09g00879 353 SUPERFAMILY "Winged helix" DNA-binding domain 9 106 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00879 Gma-Chr9 13484197 13485889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00879 15 351 Monolignol Biosynthesis Gene Families AT5G54160 32.184 9.25e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00879 K22588 K13262 gmx:100800021 724.546