Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00860 atgGACCATATTAGTCTCCTTGAAGCAGTAACTTCCAGAGCCAGGCAGCGCCAGAGGTGGCCACCAGTTCACTCTCCGATCCAAATAAGAAACTCTGCTGGAGAAACTGTGGTGGTGGCTAATGCTCAAGGGCGCGAGATGAAAGGAGTAGCTAAAGCATCGGAGGAGGTGGAAGCAAAAGTGAGAGGCTATGGAAATATGTTTGATTGCAACATATGCTTGAAGATGGCAAGAAATCTTGTGGTGACCTGCTGTGGTCACTTGTTCTGTTGGCCATGCTATTATCACTAG 291 0.4742 MDHISLLEAVTSRARQRQRWPPVHSPIQIRNSAGETVVVANAQGREMKGVAKASEEVEAKVRGYGNMFDCNICLKMARNLVVTCCGHLFCWPCYYH 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00860 96 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 96 IPR013083 -
Gma09g00860 96 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 4 95 - -
Gma09g00860 96 ProSitePatterns Zinc finger RING-type signature. 85 94 IPR017907 -
Gma09g00860 96 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 4 95 IPR045103 GO:0005783|GO:0006511|GO:0061630
Gma09g00860 96 SUPERFAMILY RING/U-box 69 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00860 Gma-Chr9 12738569 12742006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00860 41 96 C3H Transcription Factor Family AT3G58030 48.214 2.69e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00860 K10666 - gmx:100793230 102.064