Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00848 ATGGGGAAGAAAAAGAAGCAGGTAGGAGAAACAAGTGAAGATAGAGGAAATCATAAGAAAGTTGAAGATAAAAGCCCCAACTCATATGACAATGATACCTTGGCGTTTATATCAATGGCTCAAGAGTTGAAGGATGAAGGGAACAAGTTTTTCCAGAAGCGGGATGCTGAAGGAGCTTTGGTAAAATATGAGAAGGCACTCAAATTGCTTCCAAGGAATCATGTAGATGTTTCGTATCTGCGGAGTAACATGGCTGCGTGCTACATGCAGATGGGACTCGGTGAGTATCCTAGAGCAATCCGTGAATGCAATTTGGCTCTTGAAGTATCGCCAAAATATAGTAAAGCTCTGATGAAGAGGGCCAGGTGCCATGAGGCTTTAAATAGGCTGGATTTAGCGCTAAAAGATCTTAGTGCTGTTTTAAAGATAGAGCCAAATAATATCATGGCATTGGAGGTCTTGGGTAAGGTGAAGCATGCCCTTGAAGATAGGGGATTAATAGTAAATGATACAGAAATTGAGTTGCCTCCAGATTATGTTGAACCTCCTGCTTTGCCTCTGGAAAAAGTAGTGAAACAAAAGACACACAAGAAGAAGAGAAACAAAGAGAAGGTGAAGGCTTCTGATAaaattgaagaaaagcaagctgaggagaaattggaagagaagaaatctgaggaCAGCATTGTAATAAAGAAGGCCGGGGGCAGTCTGAAAGAGAAGAAGGCTAACAAATCTAAAAAGAAGGCCAAGGAAAGAATTGATGAGAAGAAGGATGATGTTAAGGAGGTTATTGAGGAAAAAAGTAATGGTAGAAGTGAAGATATACCTAAGAAAACAGCAAAACTTATTTTTGGTGAGGATATAAGATGGGCTGAATTGCCACTTAATTGCAGCCTCCTTCAGCTGAGAGAAGTTATTTGTGACCGGTTCCCTAGACTAGGAGCAGTTCTTGTCAAATATAGGGACCAAGAGGGTGATCTGGTTACTATCACTTCTGATGAAGAATTAAGGTGGGCTGAAACTGGATCACAGGGTTCTATCCGGCTGTACATAGTGGAAGCTAATCCTGATCACGATCCATTATTTGAGAAATTTAATGTAAAGAATGGAGAAAAGGTTAACACTTATAGTTCTCCTGTGAATGGTTCTGTGGTGAAAGCGAAGGACATTATTAGCTCATCATGCATTGAGGACTGGATAATTCTGTTTGCACAACTGTTCAAGAACAATGTTGGATTTGAATCTGACAGATATTTAGATTTTCATGAATTTGGGATGAAGCTCTATTCAGAGGCTGTTGAGGAGACAATTACAAGTGACGAAGCACAAGGCATATTTGACATTGCTGGTGGTAAGTTCCAAGAGATGGCAGCTCTAGCATTGTTCAACTGGGGAAATGTGCATATGTCCAGGGCAAGGAAGAAAGTGTATTTTACTGAAGATTCTTCAAAAGAGCATATGCATGAACAAATCAAAAGTTCGTATGAATGGGCGCAGAAAGAATATGCAAAAGCTGGGGAAAAATATGAAACAGCCATTGATATTAAGCCAGATTTTTATGAAGGCTTCCTGGCTCTAGGACAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGGATTATGCACTCTGTAGTAATGTAGATTTAGCAACATGGCCCTCCACTGAGGTTCTTCAGCTTTACAACAGTGCCGAGGAAAATATGGAGAAAGGAATGCTGATATGGGAAGAATCAGGAGGGCAACGATTGAGTGAAATCTTTGATCCCAAGGATATTGGATTACATCTGCAGAACATGGGATTGGATGGGCTATTCAAAAATATGTCATCAGATGAAATTGCTGCACAGGTGGAAAATATGAAGTCTCAAATAAATCTTCTGTGGGGTACCATGCTATATGAACTCTCGATAGTGGAGTTCAAATTAGGGCTACCGGTATGGCATGAAAGTTTGGAAGATGCAGCTGAGAAGTTTGAACTTGCTGGAGCTTCTGCAACAGATATAGCTGTAATGTTGAAGAACCACTGTTCTAATAACACTGATGGTCTTGGATTCAAAATTGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCTAAAAAGTGGCAGAAAGGTGTTTCATCATTTCGTTTGGAGCCCTTGTTTAGAAGAAGAATATCTAAAGTTTACCATGCCTTTGAGCTAGTATGA 2193 0.3917 MGKKKKQVGETSEDRGNHKKVEDKSPNSYDNDTLAFISMAQELKDEGNKFFQKRDAEGALVKYEKALKLLPRNHVDVSYLRSNMAACYMQMGLGEYPRAIRECNLALEVSPKYSKALMKRARCHEALNRLDLALKDLSAVLKIEPNNIMALEVLGKVKHALEDRGLIVNDTEIELPPDYVEPPALPLEKVVKQKTHKKKRNKEKVKASDKIEEKQAEEKLEEKKSEDSIVIKKAGGSLKEKKANKSKKKAKERIDEKKDDVKEVIEEKSNGRSEDIPKKTAKLIFGEDIRWAELPLNCSLLQLREVICDRFPRLGAVLVKYRDQEGDLVTITSDEELRWAETGSQGSIRLYIVEANPDHDPLFEKFNVKNGEKVNTYSSPVNGSVVKAKDIISSSCIEDWIILFAQLFKNNVGFESDRYLDFHEFGMKLYSEAVEETITSDEAQGIFDIAGGKFQEMAALALFNWGNVHMSRARKKVYFTEDSSKEHMHEQIKSSYEWAQKEYAKAGEKYETAIDIKPDFYEGFLALGQQQFEQAKLSWDYALCSNVDLATWPSTEVLQLYNSAEENMEKGMLIWEESGGQRLSEIFDPKDIGLHLQNMGLDGLFKNMSSDEIAAQVENMKSQINLLWGTMLYELSIVEFKLGLPVWHESLEDAAEKFELAGASATDIAVMLKNHCSNNTDGLGFKIDEIVQAWNEMYEAKKWQKGVSSFRLEPLFRRRISKVYHAFELV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00848 730 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Gma09g00848 730 MobiDBLite consensus disorder prediction 1 30 - -
Gma09g00848 730 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Gma09g00848 730 SMART tpr_5 78 113 IPR019734 GO:0005515
Gma09g00848 730 SMART tpr_5 114 147 IPR019734 GO:0005515
Gma09g00848 730 SMART tpr_5 40 73 IPR019734 GO:0005515
Gma09g00848 730 Pfam PB1 domain 280 353 IPR000270 GO:0005515
Gma09g00848 730 SUPERFAMILY TPR-like 39 163 IPR011990 GO:0005515
Gma09g00848 730 Gene3D Tetratricopeptide repeat domain 36 166 IPR011990 GO:0005515
Gma09g00848 730 SMART PB1_new 278 355 IPR000270 GO:0005515
Gma09g00848 730 Coils Coil 197 226 - -
Gma09g00848 730 Gene3D - 277 355 - -
Gma09g00848 730 CDD PB1 282 352 - -
Gma09g00848 730 PANTHER PROTEIN CLMP1 2 729 IPR044517 -
Gma09g00848 730 MobiDBLite consensus disorder prediction 191 219 - -
Gma09g00848 730 MobiDBLite consensus disorder prediction 1 27 - -
Gma09g00848 730 SUPERFAMILY CAD & PB1 domains 279 365 - -
Gma09g00848 730 MobiDBLite consensus disorder prediction 205 219 - -
Gma09g00848 730 ProSiteProfiles PB1 domain profile. 278 355 IPR000270 GO:0005515
Gma09g00848 730 PANTHER PROTEIN PHOX3 2 729 - -
Gma09g00848 730 Coils Coil 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00848 Gma-Chr9 12477909 12482496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00848 23 147 Calmodulin-binding Proteins AT3G25230 33.094 5.30e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00848 - - gmx:100820306 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00848 09 12477909 12482496 Gma09g00848 09 12477909 12482496 ECH
Gma17g01009 17 8598221 8600482 Gma09g00848 09 12477909 12482496 PCT
Gma13g01442 13 29187616 29191362 Gma09g00848 09 12477909 12482496 PCT
Gma09g00848 09 12477909 12482496 Gma17g01009 17 8598221 8600482 PCT
Gma09g00848 09 12477909 12482496 Gma13g01442 13 29187616 29191362 PCT