Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00846 ATGGCTGGTTCAATCGGAAGCGGAGGGAACACAAGCACGGGTGTGGAGTGGCACGTGCGACCTCCAAACCCTAAGAACCCCATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCCCCCAAAACTGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGGAAAGCAGGACTGCCTGTTGGTTACAAGGGTTGTCAATTTCATAGAGTTATTAAGGATTTTATGATTCAGGCCGGTGATTTTGTAAAGGGAGATGGTAGTGGATGTGTTTCCATCTATGGACTCAAGTTTGATGATGAAAACTTTACGGCCAAACACACTGGTCCTGGCCTTCTGTCAATGGCAAATAGCGGACAAAATACCAATGGGTGTCAGTTCTTTATAACATGTGCAAAATGTGACTGGCTTGACAACAAGCATGTTGTCTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCAGGAAGATTGAGAACGTGGCAACCGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATTGAGCGAGCGAGCGAGTTACTCATGGCGAACGCGGCGCTTCGGAACGTGAAGGTGCTCCCGAACTCGGCGAATATGGAGGAAGCGCGTCACCGAGTCTTCGAATTCTTCAGAACGGCCTGCAGATTGTTACCCTCCGTTATGGAAATCTACAACCTCTACGACGTCGTTTCCGTCTCCGAACTCCGCTCCTCCGTCGCCTCCCAGATCCGCAACAACATCCACGTCACCGATCCCAAAGTGATCGATATGCTGCTTTTCAAGGGGATGGAAGAGCTGAAGAATGTTGTGGACCATTCAAAGCAGAGGCATCATATCATTGGTCAGTACGTAGTTGGTCGGCAAGTGCAGGATTCAGCCACAAAAGACCCGGGCACCTCTACTTTTCTGAAGAATTTCTACAACACCAATTACTTCTGA 999 0.4895 MAGSIGSGGNTSTGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGQNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEIERASELLMANAALRNVKVLPNSANMEEARHRVFEFFRTACRLLPSVMEIYNLYDVVSVSELRSSVASQIRNNIHVTDPKVIDMLLFKGMEELKNVVDHSKQRHHIIGQYVVGRQVQDSATKDPGTSTFLKNFYNTNYF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00846 332 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 76 93 IPR020892 GO:0003755|GO:0006457
Gma09g00846 332 SUPERFAMILY Cyclophilin-like 17 194 IPR029000 -
Gma09g00846 332 MobiDBLite consensus disorder prediction 1 20 - -
Gma09g00846 332 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 23 194 - -
Gma09g00846 332 CDD Complex1_LYR_NDUFA6_LYRM6 219 295 IPR045299 GO:0005747
Gma09g00846 332 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 194 - -
Gma09g00846 332 Gene3D - 16 200 IPR029000 -
Gma09g00846 332 MobiDBLite consensus disorder prediction 1 17 - -
Gma09g00846 332 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 193 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 CDD cyclophilin_ABH_like 27 192 - -
Gma09g00846 332 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 192 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 IPR002130 GO:0000413|GO:0003755
Gma09g00846 332 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00846 Gma-Chr9 12403821 12412563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00846 41 182 U-box Gene Family AT5G67530 44.755 4.80e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00846 K09567 - gmx:100305521 404.06