Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00837 aTGACGTCACGATCGGGGCAGGGGAGCAGCGGCGGAGGGAGCAGCAGGACCCGTGTGGGGAAGTACGAGCTGGGTCGGACGCTGGGCGAGGGCAATTTCGCCAAGGTGAAATTCGCGAGGCACGTGGAAACTAGAGAGAACGTCGCCATCAAGATTCTCGACAAGGAGAAACTACTCAAACACAAAATGATTGCGCAGATAAAACGAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGCAGTGGGAGGTTGAAAGAAGATGAAGCAAGAAAATACTTTCAACAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTTCCATAGAGACTTAAAGCCTGAGAATTTATTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGACTACTTCACACAACATGCGGTACGCCGAATTATGTTGCTCCAGAGGTGATTAACAACAAAGGTTATGACGGTGCAAAGGCAGATTTATGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAACCAATCTATCAGCTTTATATAAAAAGATTTTCAAGGCCGAGTTCACATGTCCTCCGTGGTTCTCTTCAAGTGCAAAGAAGCTAATCAACAAAATCCTTGATCCCAATCCTGCCACTCGGATTACATTTGCTGAGGTCATTGAGAATGACTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGCTAATGTTAGTCTTGATGATTTAGATTCTATTTTCAGTGATTCTACGGATTCACAAAATCTTGTTGTAGAGAGGCGTGAAGAGGGACCTATGGCACCTGTGGCACCTGTGACTATGAATGCCTTTGAGCTTATCTCTAAATCTCAGGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTAGTTAAAAGGGAAACACGATTTACATCCAAATGTTCAGCAGATGAAATAATTTCAAAAATAGAGAAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGTGAAAAGACAGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTAGAGGTGGCCCCTTCACTATACATGGTTGAGCTGCGAAAGTCTGAAGGAGATACTCTCGAATTTCACAAGTTCTACAAAAATCTTGCTACTGGGCTGAAGGATATTGTTTGGAAAGCCGAGCCTATCGATGAAGAAAAAGATGGTGCCAATCCATCGAAATAA 1389 0.4248 MTSRSGQGSSGGGSSRTRVGKYELGRTLGEGNFAKVKFARHVETRENVAIKILDKEKLLKHKMIAQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLSALYKKIFKAEFTCPPWFSSSAKKLINKILDPNPATRITFAEVIENDWFKKGYKPPVFEQANVSLDDLDSIFSDSTDSQNLVVERREEGPMAPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEKAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIDEEKDGANPSK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00837 462 PANTHER SERINE/THREONINE KINASE 16 452 - -
Gma09g00837 462 Pfam NAF domain 324 384 IPR004041 GO:0007165
Gma09g00837 462 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00837 462 CDD CIPK_C 328 443 - -
Gma09g00837 462 MobiDBLite consensus disorder prediction 1 20 - -
Gma09g00837 462 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00837 462 CDD STKc_SnRK3 21 276 - -
Gma09g00837 462 SUPERFAMILY Protein kinase-like (PK-like) 19 307 IPR011009 -
Gma09g00837 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 452 - -
Gma09g00837 462 Gene3D Kinase associated domain 1, KA1 327 447 - -
Gma09g00837 462 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Gma09g00837 462 MobiDBLite consensus disorder prediction 1 16 - -
Gma09g00837 462 Gene3D Transferase(Phosphotransferase) domain 1 15 326 - -
Gma09g00837 462 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00837 462 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Gma09g00837 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00837 Gma-Chr9 12158464 12167332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00837 5 455 CBL-interacting serine-threonine protein kinases AT1G01140 67.396 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma09g00837 Pkinase 3.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00837 - - gmx:100788746 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01061 17 9089941 9091644 Gma09g00837 09 12158464 12167332 PCT
Gma13g01394 13 28634404 28636003 Gma09g00837 09 12158464 12167332 PCT