Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00809 ATGCGACACCATTGCCTCCAAGTCCTTCGAGCACTCTGCCATTTAAGGATAGCTCAACCTCGATCTTGCCATGAGCCTCCATGTCCTCACCGTATTGTTAAGCATGTTAAGTATATAGACATGATCTTAGATGCTGCTCTTGAATATGTGGTTTTGCAGTTTATCCCTTACATTCGTTCTGGTAGTTTTGATGACATTGGGCCAGAAAGATACATGGAAGATGAACATATAAGGATGGATGATTTGTCATCTCATCTGGGATCAATATACAACTTTCCCAAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAACTTATATAAGGAAAAACATGATAAAATTTTTCTTTGAGGATGTCAATTTCCTAGGGACATCTGAAGTCGATAACATATTTTTGGAAGAGGTGGAGGATTCCCTTAGAAAGGCATTTCTTTTGGTTGACTCAGCTTTGGCCAATGATCGCGGTGTGAATAGTTCATCAGGCACCATGGCCCTTACTGCTTGGATATTTGGAAGGCCAGAAAGAGTCAACATCAAAGGAATTATTGTTGAGACTCAGATAGCGATGTCTCCTACCACCATTATTGTTGCGTCAGGATGTGCTTTAGACTGTCTGACTATGAGCAAAGACTGGAAGAAGGAGATAATCCAAGAAATTGTGGACAAGCTGCTCTATGGAAAGCCTCACCCAAATAGAGTCATGCCTAGGGTTGGCTCAAGAGACTATGTCAGCGACATATACAATTTCTGCATCTACAAGATCATGATAGGTGAGAAGGTGAATCTACCTAAGATCCTGAGATCATCTTCTTCTACTAGATGCAAGCCTTCAAGGACAGGATATGATGTTGTTGTTGGTTTAGACTCTATTGAAACAGACCTTGGAGTTGCACCCTTGCATTCTCGTCCAGTCCCAACTGATGATGAAGCTACTGTTGATGCTCTGCTTACTCAACTTATGTTAGAAACAGACATCTCAAGACTGGAAAGCATCCATGGAGCCATTGAGTCTGTCTCTTTCGATGCAATGAAAGTAAGATTGGAAATCAGGAAGAAAGTTGAAACTGTTGTTGCTCCTCAACTCTTAACTGACATTTTCAACAAAATGCATCAAAGTCTGAGTAGACCAGACAAAAACTCAAATGATTGGTTGTTGCCCTCACGATCTCAACCTCAAACTAAACCTAAGCTATTGTTTGTTTTAGAAGGAAACGTTAGACTTTACCACGACTTCAAGGGATACAAATTATTTGAAGGACAAACCAACCATCAAGCATGGAGAGAAAAGATGGATATAGATACCCAACGCTTGGACCCAAAGATGTAG 1347 0.4113 MRHHCLQVLRALCHLRIAQPRSCHEPPCPHRIVKHVKYIDMILDAALEYVVLQFIPYIRSGSFDDIGPERYMEDEHIRMDDLSSHLGSIYNFPKPSAFYGVFDGHGGPEAATYIRKNMIKFFFEDVNFLGTSEVDNIFLEEVEDSLRKAFLLVDSALANDRGVNSSSGTMALTAWIFGRPERVNIKGIIVETQIAMSPTTIIVASGCALDCLTMSKDWKKEIIQEIVDKLLYGKPHPNRVMPRVGSRDYVSDIYNFCIYKIMIGEKVNLPKILRSSSSTRCKPSRTGYDVVVGLDSIETDLGVAPLHSRPVPTDDEATVDALLTQLMLETDISRLESIHGAIESVSFDAMKVRLEIRKKVETVVAPQLLTDIFNKMHQSLSRPDKNSNDWLLPSRSQPQTKPKLLFVLEGNVRLYHDFKGYKLFEGQTNHQAWREKMDIDTQRLDPKM 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00809 448 PANTHER PROTEIN PHOSPHATASE 2C 33 179 IPR015655 GO:0004722|GO:0006470
Gma09g00809 448 Gene3D - 55 204 IPR036457 -
Gma09g00809 448 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 33 179 - -
Gma09g00809 448 SUPERFAMILY PP2C-like 51 179 IPR036457 -
Gma09g00809 448 Pfam Protein phosphatase 2C 70 178 IPR001932 -
Gma09g00809 448 ProSiteProfiles PPM-type phosphatase domain profile. 59 448 IPR001932 -
Gma09g00809 448 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00809 Gma-Chr9 11270313 11274691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00809 72 179 PP2C-type Phosphatase Gene Family AT3G62260 65.741 5.92e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00809 K14803 - gmx:100819791 236.884