Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00778 ATGAGGAGCCAACTTGTGTGTAATGGGTGTAGGAGCATCTTGGTTTACCCTAGAGGAGCAACCAATGTTTGCTGTGCGTTGTGCAACACCATTACCTCTGTTCCTCCTCCTGGAATGGACATGTCACAACTCTATTGTGGAGGCTGTACGACATTGCTAATGTACACACGTGGTGCTACAAGTGTGAGATGTTCCTGCTGTCACACTATTAACCTTGTACCAGAATCTAATCAAGTCATTCATTGTGCGAACTGCCGGACAACACTCATGTATCCTTATGGAGCTTCCTCAGTCAAATGTGCAATTTGTTGCTATATTACTAATATCAGTATGACCAATGGAAGGCTTTCAATTCCTGTACAGAGACCAAATGGAACAGCCAACTCTGGAACAGTATCTTCAACTTCATCGTCAATGCCTTATTCTCAGAGCCAAACTGTCGTAGTAGAAAATCCTATGTCTGTTGATTCGAGTGGGAAATTGGTGAGGAATGTCGTTGTGGGCGTTACAACAGATAAGAAATGA 525 0.4324 MRSQLVCNGCRSILVYPRGATNVCCALCNTITSVPPPGMDMSQLYCGGCTTLLMYTRGATSVRCSCCHTINLVPESNQVIHCANCRTTLMYPYGASSVKCAICCYITNISMTNGRLSIPVQRPNGTANSGTVSSTSSSMPYSQSQTVVVENPMSVDSSGKLVRNVVVGVTTDKK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00778 174 MobiDBLite consensus disorder prediction 120 139 - -
Gma09g00778 174 PANTHER PROTEIN LSD1 1 174 IPR040319 -
Gma09g00778 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 43 73 IPR005735 -
Gma09g00778 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 80 107 IPR005735 -
Gma09g00778 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 4 34 IPR005735 -
Gma09g00778 174 Pfam LSD1 zinc finger 46 70 IPR005735 -
Gma09g00778 174 Pfam LSD1 zinc finger 7 31 IPR005735 -
Gma09g00778 174 Pfam LSD1 zinc finger 82 106 IPR005735 -
Gma09g00778 174 PANTHER PROTEIN LSD1 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00778 Gma-Chr9 10149415 10154311 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Gma09g00778 zf-LSD1 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00778 - - gmx:100776644 337.035