Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00775 ATGGAGCAGTTGAAATTGGCTGCAGATTCTGAAGCCAAAGAGGATAAGTCTTTGGGGCACAAGCCAAAAAATAACAATGCGCTTGAGTCTTCTGACAGTCTGAGAAATAAAAAGATATCAGCTCGATGGGATCCGGTTGAAGCAAGTCGGCCTATAATTGAAGAAGCACCTGTTTTTTATCCGACTATTGAAGAATTTGATGACACACTCAGTTACATAGCAAAGATACGACCCCTAGCTGAACCCCATGGCATCTGTAGGATTGTTCCCCCTGCTTGCTGGGCTCCACCCTGTCCTCTTAAGGAGAAAGATCTATGGGAAAATACTGAGTTTCCCACCCGTATTCAACAAATTGATTTGCTTCAAAATAGGGAACCTATGAGGAAAAAAAGTAGTGGAAGGAAGCGAAAACGTAGAAAGCACTCCAAAACAGGCACATGTAGGAGGAAGCCTGCCAATGCAGCTTCTGAAGCTAAGAATGCTTCTGAGTCTGAAGAGAAATTTGGATTCCAATCAGGGTCAGACTTCACACTTAAAGACTTTCAGCTATATGCTGATTTTTTTAAGGAATGCTACTTTGGGTTGAGAGATACTAATGGAGACAGAATAGTGAGTGACAATAACCATCAAAAGATATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGGCTTCATCCTTAACTAAGAGTGAATCAGATCAATATGCCCAGTCTGGCTGGAATCTGAACAATTTTGCCCGACTGCCAGGTTCTGTACTAAGTTATGAAGGAAGTGACATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGTTTTTCATCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTAAACTATTTGCACTGGGGGGACCCAAAAGTATGGTATGGAGTACCTGGAAGCCATGCTGCAGCCTTGGAAAAAGTAATGAGGAAGCACTTGCCTGACTTATTTGAGGAACAACCAAATCTACTCAATGATCTGGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTGTGTATCGCACAGTTCAGCATTCTGGGGAATTCGTTATTACCTTTCCAAGGGCATATCATGCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAAAGTGCTGTCGAGCTTTACAGGTTACAATGCCGCAAGACATCCCTGTCACATGACAAGCTGTTGTTTGGGTCAGCACTGGAATCTGTACGAGCCCTTGCAGAGCTAGCTCTTGGAAAGGAAACTCCAAAAAATTTGAAATGGGGAAGTGTCTGTGGGAAAGATGGAGATCTTACCAAGGCAGTTAGGGCAAGGATAAAGATGGAAGAAGAAAGGCTGGACTGTCTTCCAACTCATCTTAAGTTGCTGAAGATGAACAGTAACTTTGATTTGTACAAGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTGGGTTGTGAGTGCTCCCCTGACAGATATTCATGTCTTAAGCATGCTAATTTGTTCTGCTCGTGCGAAATGGAGAAAAGATTTGTTCTGCTTCGATATACTATAAGTGAACTGAATAAATTGCTAGAAGCATTAGAAGGAGATTCACATGCTATTGAGGTGTGGGCAAATAAAAACTTCGGAATGGTTTCTGCCAATGCCAATGAGGTTTGCATAGATAAACCAGATCTTGAGAAAGACATGTACAGAACCAAGAATTGTGAAGAAATGGAAAGCTCAACTGGCTGTGTCAGAACCAAGGATAGGTCAAATTTAAACGCACCTAGCAGTCCTAATAGTCATATTACTACAGAGATAGTGCAGTTTGAGTCTCACCCTGTAACATGTGCAGCATATGACAGTATAGATAGTCGGCATGACAATAATAATGATAAAAATTTGATCACAGACAGCAAAGATAAAGTGGATCAGGCTGGTTCTCTGGATTTGAATCTAGATGTTATCTCTGGTGAAAATGAAAATCATTTGCTGCATATTGCTGATAACCATCATAATAAAGGTGTTTCAGTAGAGGAAAAAGTATGCTGTTCAGAAGCCAAAAAGGAAGAAGACATCATGGAACTTTGTGGTGAGGGTAACTTATCAAACTTGTTTTCTGTTCTAAAGACAGATTTTTCATCTTGTTCAAGGGGTGTTCGCAATTATTGTACATTTGATGGTGGAAAAATTGAGAAGGATCTGCAAGTGGATTCAGATTCAGGAAAGCAGCACAGCAATCTATTTGAAAGGGAAGTCATAGTCACCACACATACTAGTACATCTTTGATGGACGAAAGCTGCTTAGTGCAAATGTTTGGTACTTCTGTCAAGCTTGTAAGTGTGGGATCTGTTGTTTATGGAAAGCTCTGGTGTAGTAAGCACACACTATATCCAAAAGGATTCAAGACTCAAGTTAATTTCTTTAGCATTGTTGATCCAAAAAGAATCTGTAGCTATATCTCTGAAGTCATTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTTACCATGGAAGAATGTCCAAGTGAGGCTTTCACAGATACCTCAGCAGATAATTGCTGGGAATCAGTTCTGAAGAGATTACATCATGAAATCATGAGGCAAAAGAGTCTAGGTGAACTAGAACTTCCTCCGTTTGAGCTCCTGAAAAGCATTAACGGTCATAGAATGTTTGGCTTCAAATTGCCATCTATTATTCAGGCCATTGAAGCTCAAGATCCTAGTCATCTGTGTGTAGAGTACTGGAATCACAAAGTTGCCCCTTCCGGCAGTGTTGTTgataacttcccatttggttccagtagctctttaggtaatatcaataccaaaatttttgGTTCAAGATTTCTTTCATCTGTGGGTTGA 2997 0.4051 MEQLKLAADSEAKEDKSLGHKPKNNNALESSDSLRNKKISARWDPVEASRPIIEEAPVFYPTIEEFDDTLSYIAKIRPLAEPHGICRIVPPACWAPPCPLKEKDLWENTEFPTRIQQIDLLQNREPMRKKSSGRKRKRRKHSKTGTCRRKPANAASEAKNASESEEKFGFQSGSDFTLKDFQLYADFFKECYFGLRDTNGDRIVSDNNHQKIWEPSEEEIEGEYWRIIEQPTDEVEVYYGADLETGALGSGFPKASSLTKSESDQYAQSGWNLNNFARLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHAAALEKVMRKHLPDLFEEQPNLLNDLVTQFSPSILKSEGVPVYRTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPIDWLMHGQSAVELYRLQCRKTSLSHDKLLFGSALESVRALAELALGKETPKNLKWGSVCGKDGDLTKAVRARIKMEEERLDCLPTHLKLLKMNSNFDLYKERECFSCFYDLHLSAVGCECSPDRYSCLKHANLFCSCEMEKRFVLLRYTISELNKLLEALEGDSHAIEVWANKNFGMVSANANEVCIDKPDLEKDMYRTKNCEEMESSTGCVRTKDRSNLNAPSSPNSHITTEIVQFESHPVTCAAYDSIDSRHDNNNDKNLITDSKDKVDQAGSLDLNLDVISGENENHLLHIADNHHNKGVSVEEKVCCSEAKKEEDIMELCGEGNLSNLFSVLKTDFSSCSRGVRNYCTFDGGKIEKDLQVDSDSGKQHSNLFEREVIVTTHTSTSLMDESCLVQMFGTSVKLVSVGSVVYGKLWCSKHTLYPKGFKTQVNFFSIVDPKRICSYISEVIDAGFLGPLFKVTMEECPSEAFTDTSADNCWESVLKRLHHEIMRQKSLGELELPPFELLKSINGHRMFGFKLPSIIQAIEAQDPSHLCVEYWNHKVAPSGSVVDNFPFGSSSSLGNINTKIFGSRFLSSVG 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00775 998 SUPERFAMILY Clavaminate synthase-like 199 450 - -
Gma09g00775 998 MobiDBLite consensus disorder prediction 122 166 - -
Gma09g00775 998 Gene3D Cupin 41 415 - -
Gma09g00775 998 SMART fyrn_3 826 870 IPR003888 GO:0005634
Gma09g00775 998 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 992 - -
Gma09g00775 998 SMART JmjN_1 55 96 IPR003349 -
Gma09g00775 998 ProSiteProfiles FYR domain FYRN motif profile. 812 870 IPR003888 GO:0005634
Gma09g00775 998 ProSiteProfiles JmjC domain profile. 268 431 IPR003347 -
Gma09g00775 998 SMART cupin_9 265 431 IPR003347 -
Gma09g00775 998 Pfam F/Y rich C-terminus 874 962 IPR003889 GO:0005634
Gma09g00775 998 Gene3D - 815 956 - -
Gma09g00775 998 Pfam JmjC domain, hydroxylase 298 414 IPR003347 -
Gma09g00775 998 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Gma09g00775 998 Pfam F/Y-rich N-terminus 819 867 IPR003888 GO:0005634
Gma09g00775 998 MobiDBLite consensus disorder prediction 129 147 - -
Gma09g00775 998 Pfam jmjN domain 57 90 IPR003349 -
Gma09g00775 998 MobiDBLite consensus disorder prediction 1 22 - -
Gma09g00775 998 ProSiteProfiles FYR domain FYRC motif profile. 872 962 IPR003889 GO:0005634
Gma09g00775 998 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Gma09g00775 998 SMART fyrc_3 876 968 IPR003889 GO:0005634
Gma09g00775 998 MobiDBLite consensus disorder prediction 1 34 - -
Gma09g00775 998 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00775 Gma-Chr9 10108059 10117789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00775 64 964 JUMONJI Transcription Factor Family AT4G20400 48.515 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma09g00775 JmjC 2.2e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00775 - - gmx:100781830 1991.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01812 15 21500091 21507893 Gma09g00775 09 10108059 10117789 GST