Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00765 ATGGAGTCTCAATTAGAGGGGAAAAACCAGTATTTGTATGGACCTGTGGTGCCTGAGATGAAGAGTGTTGGGAAGAGAAGTTTGGAGTGGGATTTGAATGATTGGAAGTGGGATGGGGATCTTTTTACTGCTAGGCAACTGAATTCAGTGCCATCAGATTGTAGGAGCCGCGAGTTATTTCCTACTGATCCTGAAATTCTTGCAACCGGCGGTGCTTCTAACAGTTTGTCTTCTGCATATGATGATGCTAACCTCGGGGAAGGAAAGAGAGAATTGGAGAAGAGGAGGAGGGGTGTTAATGACGATGGAGGGGTGGAGATGAATGATGGAGCTGGTTCTCTTAATTTGAACCTTGGGGGTCAAGTATACCCTATCATGGAAGGGGAGGAGAAAAGTGGAAAGAAGACAAAGATGACCGCGAGTACTTCGAGCCGGGCTGTTTGTCAGGTGGAAGATTGTAGGGCTGATCTTAGTAATGCGAAGGATTACCATCGCCGCCACAAAGTTTGTGATATGCATTCTAAGGCTACCCAGGCACTAGTTGGAAATGTTATGCAGAGATTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAATTTGATGAAGGGAAGAGAAGCTGTCGTAGGCGTCTGGCAGGCCACAATAAAAGGAGGAGGAAAACACTTCCTGATGCAACTGTAGTTAATGGAGGCTCTCTGAATGAAGAAAAGGGCAGTAGCTATCTGTTAATGAGTTTGCTAAGGATACTGTCCAATATGCATTCAAATGGCTCGGATAATATGAGGAACCAGGATGTTCTATCACATCTTTTGAGGAACCTGGCAAGTCTGGCTGGTACAATTAATGGAAGAAATATAGTGTCTTTATTAGAGGGATCTCAAGGTTTGGTAAAAGCTGGGACATCTGGAGCTGCGCAGAATGTTCCTAACACAAATTCTGATGGCCCTGAACCATCCAGACCTTTCGATTCTTCTATCAAAATGGATGATGGTCTAATCCATCGGGACCCTCCAGAGTCTATGGTACAACGTGAGACGACTCCTGCTAATGATATGGCTAAAAAATGTATAGCTTCAGGCAGTGATGGAGTAGGAAGTTTAAAATCTCCGTCAGTACCGCAGTCCTCAAATGTACTTCTGTCAAGGGATGGCCTTCCACCCCAATCAGTTGCAGCACAGACTACAGTTGGAAGAATTGGGTTAAGTAATATTGACCTGAATAATGTATATGATGATGTACAGGATTATGTTGAGAACACGAGGAATTCTTGTCCTCCTCTGCCTTCAGGGAATGGGTCTCTTGATCATCCTTTATGGATCCAATGTGACTCTCTCAAGTCAAGTCCACCACAGACAAGTAGAAACTCAGATTCAACCTCTACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGAGTCGTACAGATCGAATTGTTTTCAAACTATTTGGCAAGGCTCCAAATGATTTCCCCCATGCTCTCCGATCACAGATCCTTAACTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTAACTATATATCTCCGTCTAGAAAATTCCGCTTGGGAAGAGCTATGCTACAATCTAGAATCCAGCTTGAGAAAGCTTGCTGCGCCAAATGATTCTTTCTGGAGAACAGGATGGATATATACAAGAGTGCAGCACTCTGTAGCTTTTCTGTATAATGGTCAGGTGGTCTTAGATGCACCATTGCGCCTCAAAAGTCCGCAAAATTGTCAAATTTTATGCGTTAAACCACTTGCTGTTTCTGCAAGTTCAAGTGCTCAATTTGTTGTGAAAGGATTCAATTTTTTGCTGTCTAACACGAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAAGATAGTTGTTATGATTTGATTGACAGTGCTGATGCAGTCAATGGACATCAAGAGCTTCAGCATCTCAGTTTCTCTTGTCATGTACCGAATGTGACTGGAAGAGGGTTTATTGAGGTGGAAGACAATGGTCTTAGCAGCTGTTCCTTTCCATTCATAGTGGCAGAGCAAGAAATTTGTTTAGAGATCTGTACGCTAGACAATGTCATTGAGGCAGCAGAGATGGCTGATGACAACCAGATAAAAACTAACCTAATGGAAGAAAAGACTCAAGCATTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAGTCGTGTGAAAGTTAGGCTAGGTCCCATGGCACCTGTCCAAGATCGCTTCCATTTTAATCGGTTCATATGGCTTGTTGGCTTCTCTATGGACCATGACTGGTGTGCTGTGATGAAAAAGCTCTTGAACATTATCTTTGAGGGCACTGTTGATACTGGAGATCATGCCTCTGTTGAGTTAGCTTTGTTAGAGATGGGTCTTCTACACAAAGCTGTAAAAAGAAATTGTCGGCCTATGGTGGAAATACTATTAAAATTTGTGCCAGTTAAAGCTTCAGATGGTGGAGACAGTAATGAGAAGCAAGTCAACAAGTCCCCTGACAGATTCATATTCAGACCTGATACTGTTGGGCCTGTTGGGTTGACTCCCCTTCATGTTGCAGCAAGTATGCATGGTTCGGAGAATGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAACTGAGGCATGGAAAAGTGCTCAGGATGCTACAGGTTTGACCCCCTATGACTATGCATCCATGCGGGGCTACTACTCTTACATTCAACTTGTCCAGAGTAAAACAAGCAACACATGCAAAAGCCAACACGTGCTTGATATCCCAGGCACCCTTGTAGATAGTAACACAAAGCAGAAGCAATCAGATAGGCACAGATCATCAAAAGTTTCAAGTTTGCAGACTGAGAAGATTGAAACAACAGCAATGCCACGTCGTTGTGGGCTATGCCAGCAAAAGCTGGCGTACGGTGGCATGAGAAGGGCACTGGTTTATAGGCCAGCAATGCTGTCAATGGTGGCCATTGCAGCCGTGTGTGTCTGTGTGGCTTTGCTCTTCAAAAGTTCACCCAAAGTTTACTATGTATTCCAGCCATTCAGCTGGGAATCATTGGAGTATGGGTCAATCTAA 3099 0.4385 MESQLEGKNQYLYGPVVPEMKSVGKRSLEWDLNDWKWDGDLFTARQLNSVPSDCRSRELFPTDPEILATGGASNSLSSAYDDANLGEGKRELEKRRRGVNDDGGVEMNDGAGSLNLNLGGQVYPIMEGEEKSGKKTKMTASTSSRAVCQVEDCRADLSNAKDYHRRHKVCDMHSKATQALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTLPDATVVNGGSLNEEKGSSYLLMSLLRILSNMHSNGSDNMRNQDVLSHLLRNLASLAGTINGRNIVSLLEGSQGLVKAGTSGAAQNVPNTNSDGPEPSRPFDSSIKMDDGLIHRDPPESMVQRETTPANDMAKKCIASGSDGVGSLKSPSVPQSSNVLLSRDGLPPQSVAAQTTVGRIGLSNIDLNNVYDDVQDYVENTRNSCPPLPSGNGSLDHPLWIQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENSAWEELCYNLESSLRKLAAPNDSFWRTGWIYTRVQHSVAFLYNGQVVLDAPLRLKSPQNCQILCVKPLAVSASSSAQFVVKGFNFLLSNTRLLCALEGKYLVQDSCYDLIDSADAVNGHQELQHLSFSCHVPNVTGRGFIEVEDNGLSSCSFPFIVAEQEICLEICTLDNVIEAAEMADDNQIKTNLMEEKTQALYFIQEMGWLLHRSRVKVRLGPMAPVQDRFHFNRFIWLVGFSMDHDWCAVMKKLLNIIFEGTVDTGDHASVELALLEMGLLHKAVKRNCRPMVEILLKFVPVKASDGGDSNEKQVNKSPDRFIFRPDTVGPVGLTPLHVAASMHGSENVLDALTDDPGMVGTEAWKSAQDATGLTPYDYASMRGYYSYIQLVQSKTSNTCKSQHVLDIPGTLVDSNTKQKQSDRHRSSKVSSLQTEKIETTAMPRRCGLCQQKLAYGGMRRALVYRPAMLSMVAIAAVCVCVALLFKSSPKVYYVFQPFSWESLEYGSI 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00765 1032 MobiDBLite consensus disorder prediction 446 474 - -
Gma09g00765 1032 MobiDBLite consensus disorder prediction 68 111 - -
Gma09g00765 1032 MobiDBLite consensus disorder prediction 324 342 - -
Gma09g00765 1032 Pfam SBP domain 148 221 IPR004333 GO:0003677
Gma09g00765 1032 SUPERFAMILY SBT domain 146 227 IPR036893 GO:0003677|GO:0005634
Gma09g00765 1032 MobiDBLite consensus disorder prediction 936 958 - -
Gma09g00765 1032 Gene3D - 790 931 IPR036770 -
Gma09g00765 1032 ProSiteProfiles Zinc finger SBP-type profile. 145 222 IPR004333 GO:0003677
Gma09g00765 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 1031 IPR044817 GO:0003677
Gma09g00765 1032 MobiDBLite consensus disorder prediction 84 103 - -
Gma09g00765 1032 MobiDBLite consensus disorder prediction 301 377 - -
Gma09g00765 1032 SUPERFAMILY Ankyrin repeat 803 919 IPR036770 -
Gma09g00765 1032 MobiDBLite consensus disorder prediction 301 320 - -
Gma09g00765 1032 MobiDBLite consensus disorder prediction 941 955 - -
Gma09g00765 1032 Gene3D - 139 209 IPR036893 GO:0003677|GO:0005634
Gma09g00765 1032 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 13 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00765 Gma-Chr9 9808976 9820920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00765 1 1031 SBP-box Gene Family AT3G60030 47.760 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma09g00765 SBP 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00765 - - gmx:100776125 2041.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00765 09 9808976 9820920 Gma09g00765 09 9808976 9820920 ECH
Gma15g01801 15 20992345 21003172 Gma09g00765 09 9808976 9820920 GST
Gma17g00366 17 2989024 2994477 Gma09g00765 09 9808976 9820920 PCT
Gma09g00765 09 9808976 9820920 Gma17g00366 17 2989024 2994477 PCT