Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00761 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGATTATTCATCATAATCATTCTCGTGGTGCTATCAATATGTCTCACTTTACGAAAGAAGTTCAGAAGAGTCAATGGCAAGCTTCCACTTAGCCATGTGATATCTGTTTCAGACGAGATCAAAGAAATCAAAGTTGATCAAGTTTCAGCAAATAATCATCCTCAAAATGGTGTTTTTAAGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACCAAACAATGAATGGGGATAATAGTAGTCAATCAGGTTCATTTAATCATTTAGAGAAAGATGCTAATGGCTCTCAATCAGGTGAAGACTGCCGTGTTAAGAGCATTTCTGCTTACAGATCTTCTTCACATCCTATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGTTGGGGCCACTGGTTTACATTGAGGGACCTGGAACTTGCAACAAACAGGTTTGCAAAAGATAATGTTATTGGTGAAGGTGGGTATGGAATTGTTTATCGTGGTCAATTAATCAATGGGAATCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAAGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAATAATGGAAATTTAGAGCAGTGGCTTCATGGAGCCATGCGACAACATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCTAAAGCGCTGGCCTACTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCGGACTTTGGGTTGGCTAAGTTACTTGGAGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTGGGGTGTCGATGCTCAGAAGAGGTGTTGGATCCTAACATTGAAACTAGGCCATCGACAAGTACCCTTAAGCGTGCCCTCTTGACTGCTTTGAGGTGCGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCGCGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAGGTAGAGACTCATAGGGAGAACTCTGATACTGATAAGAGCGACAATCCAGATTATAAGCCCAGTGGCTTAAGGAACCAACGCGTGTAG 1515 0.4211 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILVVLSICLTLRKKFRRVNGKLPLSHVISVSDEIKEIKVDQVSANNHPQNGVFKSLNDKFGDRESEKVLNQTMNGDNSSQSGSFNHLEKDANGSQSGEDCRVKSISAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKDNVIGEGGYGIVYRGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRCSEEVLDPNIETRPSTSTLKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGNMEVETHRENSDTDKSDNPDYKPSGLRNQRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00761 504 Gene3D Transferase(Phosphotransferase) domain 1 258 469 - -
Gma09g00761 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
Gma09g00761 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Gma09g00761 504 MobiDBLite consensus disorder prediction 457 504 - -
Gma09g00761 504 MobiDBLite consensus disorder prediction 457 494 - -
Gma09g00761 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00761 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Gma09g00761 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00761 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00761 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Gma09g00761 504 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Gma09g00761 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Gma09g00761 504 CDD STKc_IRAK 188 454 - -
Gma09g00761 504 MobiDBLite consensus disorder prediction 106 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00761 Gma-Chr9 9736440 9740827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00761 17 456 Trihelix Transcription Factor Family AT1G70460 40.576 3.69e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma09g00761 Pkinase 9.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00761 - - gmx:100818864 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00761 09 9736440 9740827 Gma09g00761 09 9736440 9740827 ECH
Gma15g01790 15 20715694 20720135 Gma09g00761 09 9736440 9740827 GST
Gma17g00370 17 3014604 3019530 Gma09g00761 09 9736440 9740827 PCT
Gma09g00761 09 9736440 9740827 Gma17g00370 17 3014604 3019530 PCT