Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00746 ATGACTGTTTTTGTATGGGTTTTCGATTATAAAGTTATGGCACGTGTTGCTGATAAAATAAAATTGATAGATGGATCAAGGGAAGCTCTTAAGCTTTCTATAAGGATCACTGATCTTTGGTTCATTGGGATTCCCGGAAAGACTGAACAAGCCGAAATGGTGGTTGTTGATTCTGATGATCAGCTGAAGTCTCGCAAGACTGATTTGAAAGAGAATTTGACTTATGTGATGCATAATTTTAAAGTTATCAAGAATGATGGGAAATTCAGAGTTTGTGATCATGAATATAAATTATGTTTTACTGGAGTTATTGTTGTTAGGCAATGTGATATGGAACAGTTACCTTTTAGGAAATTCAGATTTGTTGCTTTTTCCAGTGTCATTGCTGGTGATTTTAAAATTAGACTCTTGGTTGGATCATATCCGGCATCGGTCAGTAATTCTTTCAAGACGTCCAAACTCATGATCAATGACCTCGTGCTGGAAATTCAAGAATTTAGAGAAAGTCTTTTAGATTTAGGGATCGAGGTTAGATCAATTTTGGCGCCTATTGGACAAGGGAGTTCACAGGTTTCAGGCTCATCTCAATTATCATCAAAAGATGTGTTTCTGTCAAAGACTGAAGTAAAAAATATCTCTGAGATTAATGCCAGTTCAGAGGAGTTTGTTTGTGTTACTGTCGCCAAGATTACAACCATAGTGATGAACAACTATTCATGGTGCTATCCGGCTTGTGGTCAATGTTATAAAAAAGTTGACATGCAAAGTGTGTCGTTCACATGTCCGTGTGGCAAAGAGAACAATCAACATGTACTGAGCAGGTATCGGGTTGAGGTGATGGTTAGTCACAAGGGTGAACAAACCAAATTTTTGATCTGGGATTGTGAATGTGCACAGTTAATTGGTCAGTCAGCGGATGAAGTCAACATGCTCAAAATAGAAgatggggatgttgatttaaatgcctctcctcaagcactagataggctattgggttgtttccttgcattcaaagtgaaggtgcaaccaaggttcaggaattctgttgttcttaaatattcagatgaaccagagttgatcaatcaatctgtgtctgttaccggggatcatgaccctcttctcaggattccattgacaccaactaagcgcgtatcttctgatgagttggataatgagtga 1179 0.3003 MTVFVWVFDYKVMARVADKIKLIDGSREALKLSIRITDLWFIGIPGKTEQAEMVVVDSDDQLKSRKTDLKENLTYVMHNFKVIKNDGKFRVCDHEYKLCFTGVIVVRQCDMEQLPFRKFRFVAFSSVIAGDFKIRLLVGSYPASVSNSFKTSKLMINDLVLEIQEFRESLLDLGIEVRSILAPIGQGSSQVSGSSQLSSKDVFLSKTEVKNISEINASSEEFVCVTVAKITTIVMNNYSWCYPACGQCYKKVDMQSVSFTCPCGKENNQHVLSRYRVEVMVSHKGEQTKFLIWDCECAQLIGQSADEVNMLKIEDGDVDLNASPQALDRLLGCFLAFKVKVQPRFRNSVVLKYSDEPELINQSVSVTGDHDPLLRIPLTPTKRVSSDELDNE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00746 392 Pfam Replication factor-A C terminal domain 228 315 IPR013955 -
Gma09g00746 392 PANTHER REPLICATION FACTOR A 1, RFA1 23 295 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma09g00746 392 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 23 295 - -
Gma09g00746 392 Gene3D - 9 109 IPR012340 -
Gma09g00746 392 Pfam Domain of unknown function DUF223 68 130 IPR003871 -
Gma09g00746 392 Gene3D - 188 359 IPR012340 -
Gma09g00746 392 SUPERFAMILY Nucleic acid-binding proteins 208 347 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00746 Gma-Chr9 9449206 9452010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00746 136 319 Core DNA Replication Machinery Family AT5G08020 26.738 2.34e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00746 - - gmx:102669158 614.379