Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00713 ATGGCTGTTTTCTCGACCAAACAGCTGAGTACTTCAACTCTGACCACCACATTCATCATCTTCTTTGTTCGCTCTGAATTCGCGGGACTCGGTGGCCTGAGAGTTTCTCCTTCTGAATTCATAGGCTCGGTGACCACAGTAGGCGATGTTTTGCAAAACGTTACCTCCATTCTCAAGTCTGAGTTCGTCAGCAATGTCAACAATAATGAGTTTCATCTTTATGATGCCGCCGCCATTTTTGCCTGTCTCGATTTGTTAGACTTGTCAGCTGATGAACTCAGCTGGTCCATTTCCGCTGTTCAAAGTCCCCAAGGGAATGATAACAGTACTGGTAATCTGAGCTCTGATTTGAGGACATGGCTGAGCGCTGTACTAGCGAATACAGATACATGCATGGAAGATTTTGAAGGTACAAATGGTAATGTGAAGGGTTTAATATCCACAGAAATTGATCAAGCAAAGTGGTTACTCCAAAAGCTACTGACCCAGGTGAAGCCATATGTGAATGATTTCAGCAGTAGAAATAGTAGGGATAAATTTCCTTCATGGGTTGAAGCAGAGGATAAGTTGTTGCTGCAGACAAATGTGGTGTCTGCGGATGCTGTAGTTGCTGCCGATGGGACTGGGAATTTTACTAAGGTGATGGATGCTGTGGAAGCAGCACCTGTTTATAGCATGAAACGCTTTGTGATTCACATAAAGAAAGGTGTTTACACCGAGAATGTTGTGATTAAGAAGAAGAAGTGGAACCTTGTGGTGATTGGTGAGGGTATGGATGTCACTATTATCTCCGCTAATCTGAGTCGTAATGAAAATTTGACCACATTCAAGACAGCTACCTTTGCTGTGAATGGCAGAGGATTCATAGCAAAAGGCATTACCTTCAGGAACACTGCAGGACCCAAAAGAAACCAATCTGTTGCTCTAAGATCAGACTCAGACCTCTCTGTGTTCTATCGATGTGGGATTTATGGCTACCAAGACAGCCTCTACGCCCACTCCTTGCGCCAATTCTATAGAGAATGCAAAATCAGTGGCACGGTGGATTTCATATTCGGCCATGCCAATGCAGTGTTCCAAAACTGCACAATATTGGCCAAGAAAGGCTTACAAAGCCAGAAGAACACAATCACAGCTCAAGGCGAAACGTACACCGATCAATCGTCTGGTTTCACCATCCAATTCTGCAACATTTCAGCGGATTATGACCTTCTGCCCTATCTTAATACCACCTCAACGTACCTCGGAAGGCCGTGGAAGCCGTATTCTAGAACAATTTTCATGCAGTCCTACATCAGTGAGGTGTTAAATCCTAAAGGGTGGCTAGAGTGGAATGGAACAATGTATTTGGACACTTTGTACTATGCTGAGTACAAGAATTTTGGACCAGGAGCTAGGCTTGATAATAGAGTTAAATGGCCAGGGTACCATGTGATGAATGATTCTAGCCAAGCTTTTAACTTCACTGTGACCAATCTTATTTTGGGGGAACTATGGCTACCTTCAACTGGTGTAACATTCATTCCTGGACTTTGA 1536 0.4375 MAVFSTKQLSTSTLTTTFIIFFVRSEFAGLGGLRVSPSEFIGSVTTVGDVLQNVTSILKSEFVSNVNNNEFHLYDAAAIFACLDLLDLSADELSWSISAVQSPQGNDNSTGNLSSDLRTWLSAVLANTDTCMEDFEGTNGNVKGLISTEIDQAKWLLQKLLTQVKPYVNDFSSRNSRDKFPSWVEAEDKLLLQTNVVSADAVVAADGTGNFTKVMDAVEAAPVYSMKRFVIHIKKGVYTENVVIKKKKWNLVVIGEGMDVTIISANLSRNENLTTFKTATFAVNGRGFIAKGITFRNTAGPKRNQSVALRSDSDLSVFYRCGIYGYQDSLYAHSLRQFYRECKISGTVDFIFGHANAVFQNCTILAKKGLQSQKNTITAQGETYTDQSSGFTIQFCNISADYDLLPYLNTTSTYLGRPWKPYSRTIFMQSYISEVLNPKGWLEWNGTMYLDTLYYAEYKNFGPGARLDNRVKWPGYHVMNDSSQAFNFTVTNLILGELWLPSTGVTFIPGL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00713 511 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 154 IPR035513 -
Gma09g00713 511 Pfam Plant invertase/pectin methylesterase inhibitor 62 158 IPR006501 GO:0004857
Gma09g00713 511 SMART PMEI_2 36 163 IPR006501 GO:0004857
Gma09g00713 511 PANTHER PECTINESTERASE 35 510 - -
Gma09g00713 511 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 35 510 - -
Gma09g00713 511 ProSitePatterns Pectinesterase signature 2. 344 353 IPR033131 -
Gma09g00713 511 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 165 IPR035513 -
Gma09g00713 511 CDD PMEI-like_4 25 166 - -
Gma09g00713 511 Pfam Pectinesterase 200 496 IPR000070 GO:0030599|GO:0042545
Gma09g00713 511 SUPERFAMILY Pectin lyase-like 196 510 IPR011050 -
Gma09g00713 511 Gene3D - 194 511 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00713 Gma-Chr9 8502201 8504886 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00713 22 511 Carbohydrate Esterase AT3G43270 57.371 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00713 K01051 - gmx:100798620 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01726 15 18691243 18693960 Gma09g00713 09 8502201 8504886 GST
Gma17g00415 17 3369014 3372685 Gma09g00713 09 8502201 8504886 PCT
Gma13g00955 13 23703865 23708206 Gma09g00713 09 8502201 8504886 PCT
Gma09g00713 09 8502201 8504886 Gma17g00415 17 3369014 3372685 PCT
Gma09g00713 09 8502201 8504886 Gma13g00955 13 23703865 23708206 PCT