Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00708 ATGGCTTATTCATCTCATAAACTCTTCTTCCTTCTGTTTGCAATTTTCTTCTCACACGCTAGTGCTGTAAACTCTTCCGATGCTTCCACAACAATTCACACCAATCTCTCTTCCATAAAATCTTTCTGCACAACCACAGCTTACCCAGAAGTTTGTTTCAACTCATTGAAGCTATCCATCTCAATAAACATAAGTCCAAACATAATCAACTACCTCTGTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCAAATCTCTTCCACAACGTTGGACACTCAAAAAACATCATAGAGAAGCAAAGAGGGTCAGTTCAAGACTGCAGGGAACTCCATCAATCCACATTGGCTTCTTTGAAAAAATCACTATCAGGGATCCGTTCTTCCAACTCCAAGAACATAGTTGATGCAAGAAGCTACCTCAGTGCAGCCTTAACAAACAAAAACACATGTCTAGAAGGCCTAGATTCTGCTTCAGGAACAATGAAGCCATCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTAAGTAACTCACTTTCAATGCTCCCTAAGCCAGAGATGGGGACTCCCAAAGTGAAAAAGAATAATAACCAGCCTTTGAAGAATGCTCCAAAGTGGGTATCAAGCAGTGACCAAAGGCTCTTCCAAGACTCAGATGGGGAAGATTATGACCCAAATGAAATGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATTAACTTTGCTCCAAACAACAGTATGGATAGGATAGTGATCTATGTCAAGGAAGGGATTTACGAGGAAAATGTGGAAATTCCAAGCTATAAGACCAACATTATGATGCTTGGCGATGGAAGTGATGTCACTTTCATAACTGGTAACAGAAGCGTCGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTGTTTCTGGTGATGGTTTTCTGGCACGTGATATAGCCATTGAGAACAGTGCAGGGCCAGAGAAGCATCAAGCAGTGGCATTGAGAGTAAATGCAGACTTAGCAGCCTTTTACAGGTGTGCAATTTATGGCTACCAAGACACTCTATATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGCACCATAGATTACATATTTGGGAATGCAGCCGCGATTCTACAAGAATGCAACATCATATCAAGAAAACCAATGCCTGGCCAATTCACAGTAATCACTGCACAATCAAGAGATAGCCCTGATGAGGACACTGGCATCTCATTCCAAAACTGCTCAATCATAGCAACCCTTGATCTCTATTCCAACTCTAGTAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGATCTATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGGAAACTTTGTATTATGGTGAGTATGACAACTATGGACCTGGTTCCAGCATAGATAAGCGTGTACAATGGTTAGGGTACCATTTGATGGATTATGGTGATGCCTATAATTTCACTGTTTCGGAGTTCATCAATGGAGATGGTTGGCTTGATACCACTTCCGTTCCTTATGATGACGGGATTTGA 1629 0.4223 MAYSSHKLFFLLFAIFFSHASAVNSSDASTTIHTNLSSIKSFCTTTAYPEVCFNSLKLSISINISPNIINYLCQSLQVAISETTKLSNLFHNVGHSKNIIEKQRGSVQDCRELHQSTLASLKKSLSGIRSSNSKNIVDARSYLSAALTNKNTCLEGLDSASGTMKPSLVKSVINTYKHVSNSLSMLPKPEMGTPKVKKNNNQPLKNAPKWVSSSDQRLFQDSDGEDYDPNEMLVVAADGTGNFSTITEAINFAPNNSMDRIVIYVKEGIYEENVEIPSYKTNIMMLGDGSDVTFITGNRSVGDGWTTFRSATLAVSGDGFLARDIAIENSAGPEKHQAVALRVNADLAAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAAILQECNIISRKPMPGQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRIYSRTVYLESYIDDFIDPKGWTKWSNEQGLETLYYGEYDNYGPGSSIDKRVQWLGYHLMDYGDAYNFTVSEFINGDGWLDTTSVPYDDGI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00708 542 CDD PMEI-like_3 41 185 - -
Gma09g00708 542 Pfam Pectinesterase 233 528 IPR000070 GO:0030599|GO:0042545
Gma09g00708 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
Gma09g00708 542 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Gma09g00708 542 SMART PMEI_2 34 185 IPR006501 GO:0004857
Gma09g00708 542 Gene3D - 228 542 IPR012334 -
Gma09g00708 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 188 IPR035513 -
Gma09g00708 542 PANTHER PECTINESTERASE 7 541 - -
Gma09g00708 542 PANTHER PECTINESTERASE 7 541 - -
Gma09g00708 542 MobiDBLite consensus disorder prediction 187 215 - -
Gma09g00708 542 SUPERFAMILY Pectin lyase-like 230 539 IPR011050 -
Gma09g00708 542 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
Gma09g00708 542 Pfam Plant invertase/pectin methylesterase inhibitor 38 185 IPR006501 GO:0004857
Gma09g00708 542 MobiDBLite consensus disorder prediction 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00708 Gma-Chr9 8443906 8446080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00708 31 542 Carbohydrate Esterase AT2G26440 66.667 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00708 - - gmx:102665651 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00708 09 8443906 8446080 Gma09g00708 09 8443906 8446080 ECH
Gma15g01719 15 18616114 18621970 Gma09g00708 09 8443906 8446080 GST