Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00707 ATGGCGTTCCAGGATTTCGACATGATCACCGAACGGCGGAGGAACGAGGAGAGGCTTAAGATGAAGAAGAAGATCCTCATCGGTCTCATCTCCGCCGTCCTCCTCGCGTGCGTCATAGGCGCCGCGACATTCGTGGTTGTCCAAAGAACAGGCCCTAATAATAATCCAAAGCACGCCACGCCATTGCCACAGAACTCCGCCGCCACGTCACACGTGGACCAAAACTCCAGGCTGGTGAAGATGATTTGCGGATCCGCTGAATACAAGGAAAAATGCGAAACCACCCTCGGAGAAGCCCTAAAGAAGGACCCCAAATTGGCGCAGCCAAAAGACCTAATGATGGTGTCCATGATTCTGGCCGAGAAGGAGGTTACAAAGGCCTTCGACGGAACGGCAAAGATGATGGACAAGGCCTCCGAGGAGGAGAAGGGGGCGTACGAGGATTGCCAGGGCTTGTTCAAGGACGCCAAGGAAGAGCTTGAATTGTCGATCACCGAGGTGGGTGATAACGACGCGGACAGGCTCTCCACAAAGGGTGCTGAATTGAACAACTGGCTTAGTGCGGTTATGTCTTACCAACAAACCTGCATTGATGGTTTCCCCAAAGGGAAGATCAAGGATGAGTTAAGCAACATGTTTAATGAGTCCAAGGAGCTTGTGAGCAACTCCCTCGCCGTTGTTTCGCAGTTCTCTTCGTTCTTTTCGATCTTCCAAGGCGCCGGGGAGCTTCATCTTCCTTGGGAGATTACCAGTGATGATGCACCTGCACCTACTACTGCTTCTGCTTCTGCTGTTGGTGCTGGTTTTGGGTCTATATTTGGTTCTGGTTCTTCTTCTTTTGGTTCtgcttctgctcctggtgttgctcctactactacaggtgttgcttctgctcctggtgtttctcctactactgcaggtgctgctcttgctcctggtgttgctcctGGCCCAGTTCCTTCTTGGGCTGCAGGCTCCATTCCTGCATGGGCTGGTCCAGTTCCTGTTTGGGCCGGCCCTGCTGAGTTTATCGGATCAAATGAGAAACCCACACCTAATGTCACCGTGGCAAAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAAGCTTTGGCTGCCATCCCACCAAAATACGACGGAAGGTACGTGGTTTATGTTAAAGAAGGAGTGTACGATGAGACCGTGACAGTGACAAAGAAAATGCTAAACGTAACCATGTACGGTGACGGACAGCAAAAGAGTATCATCACTGGCAACAAAAATTTCGTGGATGGAGTCAGGACTTTCCAAACTGCATCATTCGTTGTACTTGGAGGTGGATTCTTGGCGAAAGACATGGGATTCAGAAACACAGCCGGTGCAGAGAAGCACCAGGCAGTGGCCGCAAGAGTGCAAGCCGACCAAGCCATATTCTTCAACTGCGCCTTCGAGGGCTACCAAGACACTCTTTATGCCCAAACCCACAGGCAATTCTATCGCGACTGCTACATCTCTGGAACAATCGACTTCATCTTTGGTGACGCCTCTGCCGTTTTCCAGAACTGCACCATGGTGGTAAGAAAGCCACTTGACAACCAACAGAACATCGTGACAGCACAAGGAAGGCTCGACAAGCAAGAAAACACTGGCTTCGTCCTCCAGAAGTGCGTTATCAAGGCCGACACAGATTTGGTTCCGGTGAAGGACAGAATCAAGAATTACCTCGGAAGGCCATGGAAGGAGTATTCAAGAACCATCATCATGGAGACTCAGATTGATGACCTAATTCACCCTGATGGGTTTCTTCCCTGGGAAGGGAACTTTGCCCTAAGCACCCTTTACTACGGAGAGTACAACAACAATGGGGCTGGTTCCATCACCACTGCTAGGGTTAATTGGCCTGGCCGTAAAGTCATCAATAGAGATGAGGCTACCAGGTACACAGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACAGGTGTACCAGCTCAACTAGGCTTGTACAATTAA 1995 0.4772 MAFQDFDMITERRRNEERLKMKKKILIGLISAVLLACVIGAATFVVVQRTGPNNNPKHATPLPQNSAATSHVDQNSRLVKMICGSAEYKEKCETTLGEALKKDPKLAQPKDLMMVSMILAEKEVTKAFDGTAKMMDKASEEEKGAYEDCQGLFKDAKEELELSITEVGDNDADRLSTKGAELNNWLSAVMSYQQTCIDGFPKGKIKDELSNMFNESKELVSNSLAVVSQFSSFFSIFQGAGELHLPWEITSDDAPAPTTASASAVGAGFGSIFGSGSSSFGSASAPGVAPTTTGVASAPGVSPTTAGAALAPGVAPGPVPSWAAGSIPAWAGPVPVWAGPAEFIGSNEKPTPNVTVAKDGSGNFKTISEALAAIPPKYDGRYVVYVKEGVYDETVTVTKKMLNVTMYGDGQQKSIITGNKNFVDGVRTFQTASFVVLGGGFLAKDMGFRNTAGAEKHQAVAARVQADQAIFFNCAFEGYQDTLYAQTHRQFYRDCYISGTIDFIFGDASAVFQNCTMVVRKPLDNQQNIVTAQGRLDKQENTGFVLQKCVIKADTDLVPVKDRIKNYLGRPWKEYSRTIIMETQIDDLIHPDGFLPWEGNFALSTLYYGEYNNNGAGSITTARVNWPGRKVINRDEATRYTVEAFLQGTWINGTGVPAQLGLYN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00707 664 SMART PMEI_2 74 226 IPR006501 GO:0004857
Gma09g00707 664 Pfam Plant invertase/pectin methylesterase inhibitor 78 225 IPR006501 GO:0004857
Gma09g00707 664 ProSitePatterns Pectinesterase signature 2. 497 506 IPR033131 -
Gma09g00707 664 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 662 - -
Gma09g00707 664 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 229 IPR006501 GO:0004857
Gma09g00707 664 Pfam Pectinesterase 353 648 IPR000070 GO:0030599|GO:0042545
Gma09g00707 664 Gene3D - 347 662 IPR012334 -
Gma09g00707 664 PANTHER PECTINESTERASE 14 662 - -
Gma09g00707 664 SUPERFAMILY Pectin lyase-like 350 657 IPR011050 -
Gma09g00707 664 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 230 IPR035513 -
Gma09g00707 664 CDD PMEI-like_3 82 227 - -
Gma09g00707 664 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00707 Gma-Chr9 8434767 8437721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00707 352 664 Carbohydrate Esterase AT2G26450 63.694 3.87e-146 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00707 - - gmx:100796485 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00707 09 8434767 8437721 Gma09g00707 09 8434767 8437721 ECH
Gma15g01718 15 18613622 18615977 Gma09g00707 09 8434767 8437721 GST
Gma17g00417 17 3379147 3381504 Gma09g00707 09 8434767 8437721 PCT
Gma13g00953 13 23695748 23698079 Gma09g00707 09 8434767 8437721 PCT
Gma09g00707 09 8434767 8437721 Gma17g00417 17 3379147 3381504 PCT
Gma09g00707 09 8434767 8437721 Gma13g00953 13 23695748 23698079 PCT