Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma09g00707 | ATGGCGTTCCAGGATTTCGACATGATCACCGAACGGCGGAGGAACGAGGAGAGGCTTAAGATGAAGAAGAAGATCCTCATCGGTCTCATCTCCGCCGTCCTCCTCGCGTGCGTCATAGGCGCCGCGACATTCGTGGTTGTCCAAAGAACAGGCCCTAATAATAATCCAAAGCACGCCACGCCATTGCCACAGAACTCCGCCGCCACGTCACACGTGGACCAAAACTCCAGGCTGGTGAAGATGATTTGCGGATCCGCTGAATACAAGGAAAAATGCGAAACCACCCTCGGAGAAGCCCTAAAGAAGGACCCCAAATTGGCGCAGCCAAAAGACCTAATGATGGTGTCCATGATTCTGGCCGAGAAGGAGGTTACAAAGGCCTTCGACGGAACGGCAAAGATGATGGACAAGGCCTCCGAGGAGGAGAAGGGGGCGTACGAGGATTGCCAGGGCTTGTTCAAGGACGCCAAGGAAGAGCTTGAATTGTCGATCACCGAGGTGGGTGATAACGACGCGGACAGGCTCTCCACAAAGGGTGCTGAATTGAACAACTGGCTTAGTGCGGTTATGTCTTACCAACAAACCTGCATTGATGGTTTCCCCAAAGGGAAGATCAAGGATGAGTTAAGCAACATGTTTAATGAGTCCAAGGAGCTTGTGAGCAACTCCCTCGCCGTTGTTTCGCAGTTCTCTTCGTTCTTTTCGATCTTCCAAGGCGCCGGGGAGCTTCATCTTCCTTGGGAGATTACCAGTGATGATGCACCTGCACCTACTACTGCTTCTGCTTCTGCTGTTGGTGCTGGTTTTGGGTCTATATTTGGTTCTGGTTCTTCTTCTTTTGGTTCtgcttctgctcctggtgttgctcctactactacaggtgttgcttctgctcctggtgtttctcctactactgcaggtgctgctcttgctcctggtgttgctcctGGCCCAGTTCCTTCTTGGGCTGCAGGCTCCATTCCTGCATGGGCTGGTCCAGTTCCTGTTTGGGCCGGCCCTGCTGAGTTTATCGGATCAAATGAGAAACCCACACCTAATGTCACCGTGGCAAAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAAGCTTTGGCTGCCATCCCACCAAAATACGACGGAAGGTACGTGGTTTATGTTAAAGAAGGAGTGTACGATGAGACCGTGACAGTGACAAAGAAAATGCTAAACGTAACCATGTACGGTGACGGACAGCAAAAGAGTATCATCACTGGCAACAAAAATTTCGTGGATGGAGTCAGGACTTTCCAAACTGCATCATTCGTTGTACTTGGAGGTGGATTCTTGGCGAAAGACATGGGATTCAGAAACACAGCCGGTGCAGAGAAGCACCAGGCAGTGGCCGCAAGAGTGCAAGCCGACCAAGCCATATTCTTCAACTGCGCCTTCGAGGGCTACCAAGACACTCTTTATGCCCAAACCCACAGGCAATTCTATCGCGACTGCTACATCTCTGGAACAATCGACTTCATCTTTGGTGACGCCTCTGCCGTTTTCCAGAACTGCACCATGGTGGTAAGAAAGCCACTTGACAACCAACAGAACATCGTGACAGCACAAGGAAGGCTCGACAAGCAAGAAAACACTGGCTTCGTCCTCCAGAAGTGCGTTATCAAGGCCGACACAGATTTGGTTCCGGTGAAGGACAGAATCAAGAATTACCTCGGAAGGCCATGGAAGGAGTATTCAAGAACCATCATCATGGAGACTCAGATTGATGACCTAATTCACCCTGATGGGTTTCTTCCCTGGGAAGGGAACTTTGCCCTAAGCACCCTTTACTACGGAGAGTACAACAACAATGGGGCTGGTTCCATCACCACTGCTAGGGTTAATTGGCCTGGCCGTAAAGTCATCAATAGAGATGAGGCTACCAGGTACACAGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACAGGTGTACCAGCTCAACTAGGCTTGTACAATTAA | 1995 | 0.4772 | MAFQDFDMITERRRNEERLKMKKKILIGLISAVLLACVIGAATFVVVQRTGPNNNPKHATPLPQNSAATSHVDQNSRLVKMICGSAEYKEKCETTLGEALKKDPKLAQPKDLMMVSMILAEKEVTKAFDGTAKMMDKASEEEKGAYEDCQGLFKDAKEELELSITEVGDNDADRLSTKGAELNNWLSAVMSYQQTCIDGFPKGKIKDELSNMFNESKELVSNSLAVVSQFSSFFSIFQGAGELHLPWEITSDDAPAPTTASASAVGAGFGSIFGSGSSSFGSASAPGVAPTTTGVASAPGVSPTTAGAALAPGVAPGPVPSWAAGSIPAWAGPVPVWAGPAEFIGSNEKPTPNVTVAKDGSGNFKTISEALAAIPPKYDGRYVVYVKEGVYDETVTVTKKMLNVTMYGDGQQKSIITGNKNFVDGVRTFQTASFVVLGGGFLAKDMGFRNTAGAEKHQAVAARVQADQAIFFNCAFEGYQDTLYAQTHRQFYRDCYISGTIDFIFGDASAVFQNCTMVVRKPLDNQQNIVTAQGRLDKQENTGFVLQKCVIKADTDLVPVKDRIKNYLGRPWKEYSRTIIMETQIDDLIHPDGFLPWEGNFALSTLYYGEYNNNGAGSITTARVNWPGRKVINRDEATRYTVEAFLQGTWINGTGVPAQLGLYN | 664 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma09g00707 | 664 | SMART | PMEI_2 | 74 | 226 | IPR006501 | GO:0004857 | |
| Gma09g00707 | 664 | Pfam | Plant invertase/pectin methylesterase inhibitor | 78 | 225 | IPR006501 | GO:0004857 | |
| Gma09g00707 | 664 | ProSitePatterns | Pectinesterase signature 2. | 497 | 506 | IPR033131 | - | |
| Gma09g00707 | 664 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED | 14 | 662 | - | - | |
| Gma09g00707 | 664 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 67 | 229 | IPR006501 | GO:0004857 | |
| Gma09g00707 | 664 | Pfam | Pectinesterase | 353 | 648 | IPR000070 | GO:0030599|GO:0042545 | |
| Gma09g00707 | 664 | Gene3D | - | 347 | 662 | IPR012334 | - | |
| Gma09g00707 | 664 | PANTHER | PECTINESTERASE | 14 | 662 | - | - | |
| Gma09g00707 | 664 | SUPERFAMILY | Pectin lyase-like | 350 | 657 | IPR011050 | - | |
| Gma09g00707 | 664 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 75 | 230 | IPR035513 | - |
Showing 1 to 10 of 12 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma09g00707 | - | - | gmx:100796485 | 1219.91 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma09g00707 | 09 | 8434767 | 8437721 | Gma09g00707 | 09 | 8434767 | 8437721 | ECH | |
| Gma15g01718 | 15 | 18613622 | 18615977 | Gma09g00707 | 09 | 8434767 | 8437721 | GST | |
| Gma17g00417 | 17 | 3379147 | 3381504 | Gma09g00707 | 09 | 8434767 | 8437721 | PCT | |
| Gma13g00953 | 13 | 23695748 | 23698079 | Gma09g00707 | 09 | 8434767 | 8437721 | PCT | |
| Gma09g00707 | 09 | 8434767 | 8437721 | Gma17g00417 | 17 | 3379147 | 3381504 | PCT | |
| Gma09g00707 | 09 | 8434767 | 8437721 | Gma13g00953 | 13 | 23695748 | 23698079 | PCT |
Showing 1 to 6 of 6 entries