Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00706 ATGGATAAAATCCACCATTGTTGTTCTTTTCTTAATAGGGGAATGAGAACACAAGAATTGGTGGTAACCTTTTTAGTATTGGGATGTGCACTGACGTGGGTCTCCATGTCTGATGCACTTGTTGGTGGTCATCAAGAGCATGCTCACAATGAATGCAATCTTACAAGATATCCCAATCTATGTGCTGAAACCTTGATGGAATTGGGTTTAGGGAATCAAAATGTTGACAACAATATTGAGGCTCTTGTTAACAAAACCATATTTGAAACCAGCTTGCCAAGTTCATATTTTGCTGAATTCAAGACTGGGGAAGCTCAACCAGTTCATTCAGTTGTTGCAGACTATTGTGAAGAGCTAATGAGCATGTCACTGAAAAGGCTAGACCAATCCTTGAGAGCACTGAAATCCCCTAAAAGAAACACCAATGACATCCAAACATGGCTAATTGCTTCTCTAACTTTCCAACAATCTTGCAAAGACCATGTTCATGCACACACCTCAACACTCTCTACAGATGATCACCTTATGGAAAGGATGTCCAACAAAATGGACTATCTCTCACAATTGGGAAGCAACTCATTAGCCCTTGTTAACCAAATGAGCACAACAACAAGCCACAATATTGGTGATAATAATAATGAAAAGGAACATGAATTTCCCATTTGGGTATCATCCAAAGGACGAAAACTGCTTCAAGGAGCAACCATAAAGGCAAATGCAATAGTTGCGCAAGATGGTTCAGGAAACTACAAAACAGTTTCTGAAGCCATCGAGGCAGCTTCAGGAACAACAAGGTTTGTGATTTATGTTAAGGAAGGGGTTTATAAGGAGAAGATTAACACCAACAAGGATGGTATCACCTTGATTGGAGATGGAAAATACTCTACTCTTATTGTTGGAGATGACAGTGTTGCCAAGGGTGCTATCTTACCTGACTCCGCCACATTTACAATCACAGGCGATGGCTTCATTGCGCGAGACATCGGCTTCCACAACAATGCGGGCCCCGAGGGCCAGCAGGCCGTAGCCCTAAACATAGCCTCCGACCGCTCCGTCTTTTACAGATGCAGTATAGCAGGCTACCAGGACACCCTCTACGCCCACGTCCTCCGCCAGTTCTACCGAGAATGTGATATCTATGGCACAATCGACTTCATCTTTGGAAACGCTGCCGCGGTCTTCCAGCGCTGCAGCCTCGTCCTCCGCCGCCCCCACGGCCACGCCAGCTACAACGCCGTCCTGGCCAACGGCCGAACCGACCCGGGCCAGAACACCGGCTTCTCCGTCCACAAGTGCACTATATCGCCGAGCTCCGAACTCTCCTCGGTGAAGGGCTCTTATCTTTCTTTTCTTGGGAGGCCCTGGAAGGAGTATTCTAGGGCTGTGGTGATGGAGAGCAGCATAGACGACGCCGTTGCTGCTAGTGGCTGGATCGAGTGGCCTGGGTATGGAGGGTCTGTGTTGAGGACTTTGTATTTTGCCGAGTATGGGAATGAAGGTGCCGGCGCTGGAACTAGCAAGAGGGTGCATTGGCCTGGGTTTCGTGTTCTTGAGGCTGAAGAAGCTCTTAAGTTCACTGTTGCTGGTTTTATCGGTGGAAACTCGTGGATTCCCTCCACTGGAGTTGCTTTCATTTCGGGGCTTAATTAA 1650 0.4709 MDKIHHCCSFLNRGMRTQELVVTFLVLGCALTWVSMSDALVGGHQEHAHNECNLTRYPNLCAETLMELGLGNQNVDNNIEALVNKTIFETSLPSSYFAEFKTGEAQPVHSVVADYCEELMSMSLKRLDQSLRALKSPKRNTNDIQTWLIASLTFQQSCKDHVHAHTSTLSTDDHLMERMSNKMDYLSQLGSNSLALVNQMSTTTSHNIGDNNNEKEHEFPIWVSSKGRKLLQGATIKANAIVAQDGSGNYKTVSEAIEAASGTTRFVIYVKEGVYKEKINTNKDGITLIGDGKYSTLIVGDDSVAKGAILPDSATFTITGDGFIARDIGFHNNAGPEGQQAVALNIASDRSVFYRCSIAGYQDTLYAHVLRQFYRECDIYGTIDFIFGNAAAVFQRCSLVLRRPHGHASYNAVLANGRTDPGQNTGFSVHKCTISPSSELSSVKGSYLSFLGRPWKEYSRAVVMESSIDDAVAASGWIEWPGYGGSVLRTLYFAEYGNEGAGAGTSKRVHWPGFRVLEAEEALKFTVAGFIGGNSWIPSTGVAFISGLN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00706 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 200 IPR035513 -
Gma09g00706 549 SUPERFAMILY Pectin lyase-like 234 547 IPR011050 -
Gma09g00706 549 ProSitePatterns Pectinesterase signature 2. 379 388 IPR033131 -
Gma09g00706 549 Gene3D - 233 548 IPR012334 -
Gma09g00706 549 Pfam Plant invertase/pectin methylesterase inhibitor 50 196 IPR006501 GO:0004857
Gma09g00706 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 199 IPR006501 GO:0004857
Gma09g00706 549 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED 19 547 - -
Gma09g00706 549 CDD PMEI-like_3 52 202 - -
Gma09g00706 549 Pfam Pectinesterase 239 534 IPR000070 GO:0030599|GO:0042545
Gma09g00706 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 201 IPR035513 -
Gma09g00706 549 PANTHER PECTINESTERASE 19 547 - -
Gma09g00706 549 SMART PMEI_2 43 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00706 Gma-Chr9 8413784 8418126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00706 15 548 Carbohydrate Esterase AT2G45220 41.774 3.14e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00706 K01051 - gmx:100795439 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00706 09 8413784 8418126 Gma09g00706 09 8413784 8418126 ECH