LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g00698	ATGTCAGACAATAacactactcctcaaataaagtatgatgtttttgttagcttcaggggcaaggacatccgccaggactttcttagccatttggttgaggcttttgacatgaagagaatatatgcctttgtagataataaacttgagaaaggggaaaagatatggaaatcacttgttgaagcaattgaaggatcattgatttcattgatcatattttcacaaggctatgcttcttctcattggtgtttagaagaacttgagaaaatacatgaatgcaaagagaaatatggacaaattataatccccgttttctaccatttagaacccacacatgtacgatatcaatcatctgatgcattcgaaaaagcatttgctaagcatggaaaaaaatatgagAGCAAGGTGCAACAATGGAGAGATATTTTGAAGAAATCTGCTGATTTATCAGGAATCGAGTCATCAAACTTTAAAACTGATGCTGAGTTGGTTAAAAAAATTACCAATGTTGTGCTGATGAGGCTGCATAAAACCCATGTTAACTTGAAAAGACTTGTTGGAATTGGCAAAAAAATTGCAGATGTGGAATTGTTGATACGCAAAGAACCAGAAGACATCCGTCTTATTggattatggggtatgggcggtattggcaagacaatccttgcagaacaagtatttattaaactacggtctggatatggaggttgtttatttttagccaatgaaagagaacaatcaaggaaacatgggatgctttctttgaaggaaaaagttttttctgaactactaggaaatggtgctaaaattgacacgccaaattcgttgcctgatgatattgttaggagaattggtcgaatgaaagttcttattgttcttgatgatgtgaatgattcaaatcacttagaaaaattacttggacctcttggtaattttggatcaggtagtagaatcattgtaacaactagagatatgcaagttcttaaagctaacaaagctgatgaggtataccCGCTTAGAGAATTCAGTTTAAATCAAGCACTTGAACTTTTCAATTTGAATTTCTTTAACCAATGTGATGATCAAAGGGAGTATGACAACTTATCAAAAAGggtggtcaattatgccaaaggcattccattagttcttaatgagttggcttatcttcttcgtgcaagaaataaggaagagtggggaagtgagttagacaagcttgaaaaaatacctcttccagaagtttatgatagaatgaaactgagctatgatgatctagatcccaaagagcaacaaatttttctagatcttgcgtttttcttTGGTAGATCACATACAGAGATAAAGGTGGACTATCTGAAATCTTTATTGAAAAAAGATGGTGAAAGTGGAGATTCAGTGTTTATTGTGTTAGAAAGGATGAAAGATAAAGCTCTCATAACTTCCTCTAAAGATAATTTTATATCTATGCATGATAGTTTACAAGTTATGGCTCAGGAGATTGTTCGTCGAAAGTCTAGCAATACTGGAAGCCACAGTCGGTTGTGGGATCTTGATGACATTCATGGAGAAATGAAAAATGACAAGGTTACTGAGGCCATTAGAAGTATACAAATTAACTTGCCAAAAATTAAGGAGCAAAATTTAACGCATCACATATTTGCTAAGATGAGCAGTCTAAAATTTCTGAAAATTTCTGGCGAAGATAATTATGGTAACGATCAACTTATTCTTGCTGAAGAGCTTCAATTTTCGGCAAGTGAACTAAGATTTCTTTGTTGGGATCATTGCCCTCTAAAATCCTTACCAGAAAGTTTTTCTAAGGAAAAACTTGTAATGTTGAAATTGCTACGCAGCAAAATAGAAAAACTTTGGGATGGAGTTCAGAATTTGGTGAATTTAAAAGAAATTAACCTCAGTGGCTCTGAGAAGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATCTTGAAGTACTGCTTCTCCGTGGTTGTTCTATGTTGACTAGTGTGCATCCATCTGTTTTCTCTCTGATAAAACTTGAGAAATTGGACCTTTATGGCTGTGGCTCCCTTACCATTCTCTCAAGCCATTCTATATGCAGCCTTAGTTATCTCAACCTTGAACGTTGCGTGAACCTTAGGGAATTCTCAGTGATGTCGATGAATATGAAAGACCTGAGATTAGGATGGACCAAGGTCAAAGAACTTCCCTCATCATTTGAACAGCAGAGCAAGCTTAAATTGCTACATCTAAAAGGAAGTGCTATTGAGAGGTTACCTTCATCCTTCAACAACCTTACACAACTGCTACATCTAGAGGTAAGCAATTGCAGCAATCTTCAAACAATACCAGAGCTTCCGCCGCTCCTTAAAACTCTAAATGCACAATCCTGCACCTCACTTCTGACTCTACCAGAGATTCCCTTGTCCATTAAAACTCTAAGTGCCATAGACTGCAAATCATTGGAGACTGTATTTCTTTCATCGGCTGTCGAACAATTAAAGAAAAATAGGAGACAGGTTCGGTTCTGGAATTGCTTGAACTTGAATAAAGATTCTCTAGTGGCTATTGCGTCGAATGCACAAATCGATGTGATGAAATTTGCAAACCAACACTTATCTCCACCAAGTCAAGATCTTGTTCAAAATTACGATGATTATGATGCCAATCATCGCTCTTATCAAGTGGTTTACGTGTATCCAGGAGGCAATGTTCCAGAGTGGTTGGAGTATAATACAACAAATGCTTATATAATTATTGATCTCTCTTCTGGTCCACCTTTCCCCTTCCTTGGCTTCATTTTCAGCTTTGTCATTGGTGAGTACCTACACACAGACACCAAGGGCAGACTTGAAGTTAGCATCACTATAAGTGATGATGAGAGTGAAGGCAATCAGGATAGTGTCAGAATGTACATAGATTTTGAAGGTAGGAAAATTGAATCAGATCATGTGTGTGTGGTGTATGACCAAAGATGTTCCAGCTTCCTAAGTAGcaaggtcaaaaatcaaacaaggttaaaaatcaaGGTTACAATGGGGGTGCCAGATTATGCACTGCCACAAGGTTATAATAGAGGTGTGAGATTCGGTGTCAGTCCAATAAGCACCTCGGCTTATGAGAGTTTCATTCAACAAATGAAATTGCGTAATTCAATATCTCAGTTTCATTAA	3168	0.2582	MSDNNTTPQIKYDVFVSFRGKDIRQDFLSHLVEAFDMKRIYAFVDNKLEKGEKIWKSLVEAIEGSLISLIIFSQGYASSHWCLEELEKIHECKEKYGQIIIPVFYHLEPTHVRYQSSDAFEKAFAKHGKKYESKVQQWRDILKKSADLSGIESSNFKTDAELVKKITNVVLMRLHKTHVNLKRLVGIGKKIADVELLIRKEPEDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHGMLSLKEKVFSELLGNGAKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGNFGSGSRIIVTTRDMQVLKANKADEVYPLREFSLNQALELFNLNFFNQCDDQREYDNLSKRVVNYAKGIPLVLNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYDDLDPKEQQIFLDLAFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDSLQVMAQEIVRRKSSNTGSHSRLWDLDDIHGEMKNDKVTEAIRSIQINLPKIKEQNLTHHIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPESFSKEKLVMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPELPPLLKTLNAQSCTSLLTLPEIPLSIKTLSAIDCKSLETVFLSSAVEQLKKNRRQVRFWNCLNLNKDSLVAIASNAQIDVMKFANQHLSPPSQDLVQNYDDYDANHRSYQVVYVYPGGNVPEWLEYNTTNAYIIIDLSSGPPFPFLGFIFSFVIGEYLHTDTKGRLEVSITISDDESEGNQDSVRMYIDFEGRKIESDHVCVVYDQRCSSFLSSKVKNQTRLKIKVTMGVPDYALPQGYNRGVRFGVSPISTSAYESFIQQMKLRNSISQFH	1055

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g00698	1055	PRINTS	Disease resistance protein signature	375	389	-	-
	Gma09g00698	1055	PRINTS	Disease resistance protein signature	762	778	-	-
	Gma09g00698	1055	PRINTS	Disease resistance protein signature	207	222	-	-
	Gma09g00698	1055	PRINTS	Disease resistance protein signature	282	296	-	-
	Gma09g00698	1055	SUPERFAMILY	"Winged helix" DNA-binding domain	411	520	IPR036390	-
	Gma09g00698	1055	Pfam	NB-ARC domain	197	409	IPR002182	GO:0043531
	Gma09g00698	1055	Gene3D	-	9	172	IPR035897	-
	Gma09g00698	1055	Gene3D	Ribonuclease Inhibitor	695	840	IPR032675	-
	Gma09g00698	1055	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	8	1050	IPR044974	GO:0006952
	Gma09g00698	1055	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	179	434	IPR027417	-
	Gma09g00698	1055	Gene3D	-	341	424	IPR042197	-
	Gma09g00698	1055	Gene3D	-	173	335	IPR027417	-
	Gma09g00698	1055	Pfam	TIR domain	11	176	IPR000157	GO:0007165
	Gma09g00698	1055	ProSiteProfiles	TIR domain profile.	10	174	IPR000157	GO:0007165
	Gma09g00698	1055	Gene3D	Ribonuclease Inhibitor	508	694	IPR032675	-
	Gma09g00698	1055	SUPERFAMILY	L domain-like	541	844	-	-
	Gma09g00698	1055	PANTHER	DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)	8	1050	-	-
	Gma09g00698	1055	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	150	IPR035897	-
	Gma09g00698	1055	SMART	till_3	11	148	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g00698	Gma-Chr9	8369435	8375395	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g00698	12	816	WRKY Transcription Factor Family	AT4G12020	31.425	2.48e-89	313

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g00698	-		-	gmx:100794380	2072.74