Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00652 ATGGCTTTAGCACTTTCCTCCACCGCATTGTCAAGTCTTCCAAACAGAGAAATTCGTCAAAAGGGTTTCCCAGAAAGAACACCCACATGCTTGAGCCTGACCAGAAGAACAATTGCAAATGCTACAAAAGGAGTCTCAGCTGTCTGTGAACCACTTCCTCCAGATAGACCATTGTGGTTCCCTGGTAGCTCACCTCCTGAGTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGATTCGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGTTAAAGTGGTTCGCTCAGGCAGAACTAATGCATTCAAGATGGGCAATGCTGGCAGTGTTCGGAATTCTGGTCCCCGAATTGCTCGAAAGAATCGGCTACATCGAGAACTTCTCTTGGTACGATGCTGGCACACGAGAGTATTTTGTGGACCCCACAACCTTATTCGTCGTGCAAATGGGCCTGATGGGCTGGGTGGAGGGTCGAAGATGGGCCGACATTGTTAACCCAGGGAGTGTTGACATTGAGCCCAAAGTGCCACACGTCACGAACCCAAAGCCCGATGTTGGGTACCCTGGTGGGCTTTGGTTTGACCCAATGATGTGGGGAAGAGGTTCACCTGAGCCAGTGATGGTTTTGAGGACCAAGGAGATCAAGAATGGAAGACTTGCAATGTTGGCTTTTGTTGGGTTCTGGTTCCAAGCTATTTATACAGGGGAAGGACCCATTGAAAATTTGATGGCACACCTTGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACGCGTTAG 783 0.4943 MALALSSTALSSLPNREIRQKGFPERTPTCLSLTRRTIANATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVFGILVPELLERIGYIENFSWYDAGTREYFVDPTTLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00652 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Gma09g00652 260 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 258 - -
Gma09g00652 260 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Gma09g00652 260 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Gma09g00652 260 SUPERFAMILY Chlorophyll a-b binding protein 55 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00652 Gma-Chr9 7441234 7443995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00652 54 259 Chloroplast and Mitochondria Gene Families AT3G61470 68.447 1.57e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00652 K08908 - gmx:100800374 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00652 09 7441234 7443995 Gma09g00652 09 7441234 7443995 ECH
Gma15g01677 15 17476194 17480034 Gma09g00652 09 7441234 7443995 GST