Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00640 ATGACCCTTATGAAAATCCTATGGAAATCACTCTTCCCCGGTTGTTACAAGGGTGAATATCCCTCTCCAAAGCCAAAGAAAGTGGTGGCTACAAAGCCAAATTCTTCACACAGGATTTCTGTGACGGATTTGAGTTATCCAAGCACGACTCTTTCGGAGGATCTCTCTATTTCTCTAGCGGGGACCAACCTCCATGTTTTCTCAATCGCTGAGCTCAAGATTATCACTCAACAATTCTCTTCTAGCAATTTTCTTGGAGAAGGTGGGTTCGGACCGGTTCATAAGGGGTTCATTGATGACAAGCTTAGGCATGGCCTCAAGGCTCAACCCGTGGCTGTTAAGCTCTTGAACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAGGTTGTTTTTCTGGGGCAACTTAGGCATCCACATCTCGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGGGTTTTGGTGTATGAATATTTACCAAGAGGAAGCTTGGAGAATCAATTATTTAGAAGATTCTCAGCATCACTTCCATGGTCAACGAGAATGAAAATTGCTGTTGGAGCTGCGAAGGGCCTAGCCTTTCTTCATGAGGCTGAGAAGCCAGTCATCTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGACTCTGATTACAATGCAAAGTTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTTATGGGTACACACGGCTACGCAGCTCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTAGTGCTATTGGAGCTGTTAACAGGAAGAAGGTCAGTGGACAAAAACCGGCCTCCAAGGGAGCAAAACCTAGTGGAGTGGGCAAGGCCAATGCTAAACGATTCAAGGAAACTCAGCAGAATAATGGATCCTAGACTTGAAGGCCAATATTCAGAAATGGGAACAAAAAAAGCAGCAGCATTGGCATACCAATGCCTCAGCCACAGGCCAAGGAGCAGACCCTCAATGAGCACAGTGGTCAAGACCCTTGAGCCACTTCAAGATTTTGATGACATTCCAATTGGAACATTTGTGTACACAGCTCCACCAGATAATAATAATGAAGTGCAGCATAAGGATCAATGTGAGACACCTAAGAGGAGGGAAAATAATAATAATGGTCACAATATTCATAGGAATGGCCACAGGCATCATCCACTTAAATCCCCCAAGGCCCCAAGGTCACAATCACAATCACAATCACAGTCACATTTACGTCCAAATGACCACAAACACAGAAATGGAAGAGGAAGTGGACCAAATTCTCCTCCATCACATGTGAAAATAATTAGGCCAGGAGTTATTGCTTGTTAG 1392 0.4447 MTLMKILWKSLFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSISLAGTNLHVFSIAELKIITQQFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLNLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRVLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKNRPPREQNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPDNNNEVQHKDQCETPKRRENNNNGHNIHRNGHRHHPLKSPKAPRSQSQSQSQSHLRPNDHKHRNGRGSGPNSPPSHVKIIRPGVIAC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00640 463 MobiDBLite consensus disorder prediction 370 463 - -
Gma09g00640 463 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Gma09g00640 463 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Gma09g00640 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gma09g00640 463 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00640 463 PANTHER OS01G0588500 PROTEIN-RELATED 23 415 - -
Gma09g00640 463 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Gma09g00640 463 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Gma09g00640 463 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 415 - -
Gma09g00640 463 MobiDBLite consensus disorder prediction 382 402 - -
Gma09g00640 463 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00640 Gma-Chr9 7260471 7264012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00640 65 393 Glycoside Hydrolase AT3G07070 50.000 3.82e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma09g00640 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00640 - - gmx:100797003 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00640 09 7260471 7264012 Gma07g00373 07 3334683 3336610 ECH
Gma09g00640 09 7260471 7264012 Gma14g00992 14 11808614 11811081 ECH
Gma09g00640 09 7260471 7264012 Gma17g02091 17 38240133 38260340 ECH
Gma09g00640 09 7260471 7264012 Gma04g00526 04 4692713 4695673 ECH
Gma09g00640 09 7260471 7264012 Gma06g00516 06 4399927 4402906 ECH
Gma09g00640 09 7260471 7264012 Gma09g00640 09 7260471 7264012 ECH
Gma15g01660 15 17195070 17198705 Gma09g00640 09 7260471 7264012 GST
Gma17g00460 17 3792470 3795039 Gma09g00640 09 7260471 7264012 PCT
Gma13g00908 13 23232630 23235097 Gma09g00640 09 7260471 7264012 PCT
Gma09g00640 09 7260471 7264012 Gma17g00460 17 3792470 3795039 PCT
Gma09g00640 09 7260471 7264012 Gma13g00908 13 23232630 23235097 PCT