Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00621 ATGGGCGATGTTCTAAGCCCCTTCACAATCTCATCCCCTCCTCCACCCTCCTCCCCATCAACCAAGAACAACAGCATGCCCATGTTGTACTACGGTCTCGTGGTGGTCGGAACCGCGGCCATAGTGCTAGCCATATACAACCTCGTCCTCCTAAGACGGAGCCAAACGCGCCACGCGCGGCCGGCGCAAAGTATCACGCATAATAGAGATATTGTACAAGTTGTTTCCGAAAGAACAAGGAGCTTCGAGGACAGCCAACAACGAAACTTGTTGTCGAGCTTCAAGTACAAGAAAGAAGTAGTGGCAAaagaagaagaagaagaagaagaagaagaGCAAGATGATGAGTTTGAGTGCTCCGTTTGCTTATCGGTTTACGAAGAAGGCGAAGAGGTGAGAAAGCTTCCACAGTGCAAGCACTATTTCCACGTTCTTTGCATAGACATGTGGCTTTACTCCCACTTGGATTGCCCAATTTGTAGAACTCCCGTTGATGTTTTGTGTCCGGGGGAGAATTCTCCTGATGGGATGATGGAATCCGGTGCTGGAATGGCAGCATCTCTCTAG 567 0.4762 MGDVLSPFTISSPPPPSSPSTKNNSMPMLYYGLVVVGTAAIVLAIYNLVLLRRSQTRHARPAQSITHNRDIVQVVSERTRSFEDSQQRNLLSSFKYKKEVVAKEEEEEEEEEQDDEFECSVCLSVYEEGEEVRKLPQCKHYFHVLCIDMWLYSHLDCPICRTPVDVLCPGENSPDGMMESGAGMAASL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00621 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 166 IPR013083 -
Gma09g00621 188 SMART ring_2 119 160 IPR001841 -
Gma09g00621 188 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Gma09g00621 188 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 11 172 - -
Gma09g00621 188 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 172 IPR044675 -
Gma09g00621 188 Pfam Ring finger domain 118 161 IPR001841 -
Gma09g00621 188 MobiDBLite consensus disorder prediction 1 23 - -
Gma09g00621 188 SUPERFAMILY RING/U-box 109 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00621 Gma-Chr9 6974704 6975420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00621 20 164 C3H Transcription Factor Family AT1G04360 31.333 4.76e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00621 - - gmx:102662517 335.88