Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00620 ATGGAAGAAGACAAAGGCGTGGCAGACAAGAAAGTGACAAAGAATGACGAGGTTGTTCTACGAATTTCAGACTCTGAAGAAGCCATGCATGCAGAGAAGGATCATAGAGATTCTAGAAGTTCCCTAGAAGCTGAAATCAGTTCCCTTTCTCCTCAGCACAGCACCCACATAGGTAAAGGGTTTACAGATTCACATGGTGAACTCACAGAGCTTGAGAATCTAAGAAACAAGGGTCAAGTTTCCTCAGAGTTGGTGACAACTACAAAGAGGTTGATGTGTCGGTCGGAATTTTCGAAGCCAAAGTCCAGATTGGTGGAGCCACCATGTCCAAAAGACGCAACCTTTGTTGTAGAAAAGGCTCAAATGACAAGTTCCAATTTATCTGCAAGGAATTCTTCCAACAAGAATGTTTCTGAAGCAACTATTGTTACCCCAAGAACCCCCTTGCTTGGGACTCCGCGGGAAGAAGATGATGATGATGAAGAAGTGTACAAGGCTGCACTTATTGAAATGACCAAGAGATCGGGTAAGAAGTATAGTGTACTGGGTTTTGTTGAGTGGTTTGCTTTTGTTTGCATAATGGGGTTTTTGATTGCAAGCTTGACAGATCATAAGTTGCAACATTGGGAAATTTGGGGTTTGGAACTGTGGAAATGGTGTGTGTTGGTGCTGGTTATACTATGTGGTAGATTGGTCACTGAGTGGTTTATCAATGTTTTGGTATTCTTGATTGAGAGGAACTTCTTGTTTAAGAAAAAAGTTTTGTATTTTGTTTATGGTGTGAAGAATAGTGTTCAGGGCTTTGTATGGTTAAGTTTGGTTCTTTTGACATGGGTTCTGCTTTTCCACCATGATGTGGAGACAGCCAGAAAGTTTACTAGGATTCTTAATTACATTACTAGGGCCCTTGCTTCTTGTCTTATTGGAGCAGCTATATGGTTAGCCAAAACATTTTTGATAAAGCTGTTAGCTTCAAATTTTCAATCTACGAGATTTTTTGATAGGGTCCAAGTATCAATCTTTCACCAATACATTCTGAGGACACTTTCAGGTCCTCCCTTGATGGATATGGCTGAAACAGTAGGCAACATGTCGAGTAGTGGTCGACTCAGTTTTAAGGCCATGATTAATAAGAATGAAGGGAAGGAAGAACAAGTCATTGATGTAGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTAATGTGATAAGCAGTTCTGGGTTGTCTACCATTTCCTATACACCAGAGAGTGCCTTTGAAGATGAGAGTGACCAGAAAGACAATGAAATTACTAGCGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTCAGGAACGTAGCCAAGCCAGGAAACAAGTATATCGAGAAAGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGAAAATGTTCTTCCACTATTTGAAGGGGCAGTTGAGACTGGAAGAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTGAAAGTCTACCTTGAACGCCGATCACTTGTACATTCACTAAATGATGCCAAAACTGCTGTTGATGACTTGAATATGCTTGCTTCTGTAATTGTGATTATTGTGATCACTGTTGTGTGGCTTCTTATTATGGGTTTCTTAAACACTCAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGTCTTCATGTTTGGCAACACAGCCAAGGCTGTATTTGAAGCTATTATATTTGTTTTTGTGATACACCCGTTTGATATTGGTGATCGCTGTGTCGTTGATGGTGTTCAGATGGTTGTGGAAGAGATGAACATACTAACTACAGTCTTTCTGAGATATGATAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTTCTACAGGAGTCCAGAAATGCAAGATTCAGTTGAATTTTCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCGAAGTTAAAAGC 2006 0.3978 MEEDKGVADKKVTKNDEVVLRISDSEEAMHAEKDHRDSRSSLEAEISSLSPQHSTHIGKGFTDSHGELTELENLRNKGQVSSELVTTTKRLMCRSEFSKPKSRLVEPPCPKDATFVVEKAQMTSSNLSARNSSNKNVSEATIVTPRTPLLGTPREEDDDDEEVYKAALIEMTKRSGKKYSVLGFVEWFAFVCIMGFLIASLTDHKLQHWEIWGLELWKWCVLVLVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKNSVQGFVWLSLVLLTWVLLFHHDVETARKFTRILNYITRALASCLIGAAIWLAKTFLIKLLASNFQSTRFFDRVQVSIFHQYILRTLSGPPLMDMAETVGNMSSSGRLSFKAMINKNEGKEEQVIDVDKLKKMKQEKVSAWTMKGLINVISSSGLSTISYTPESAFEDESDQKDNEITSEWEAKAAAYRIFRNVAKPGNKYIEKDDLLRFMKIEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYLERRSLVHSLNDAKTAVDDLNMLASVIVIIVITVVWLLIMGFLNTQVLVFISSQLLLVVFMFGNTAKAVFEAIIFVFVIHPFDIGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMQDSVEFSVDVSTSIESIGALKAKLK 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00620 668 MobiDBLite consensus disorder prediction 22 64 - -
Gma09g00620 668 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 13 668 IPR016688 -
Gma09g00620 668 SUPERFAMILY Sm-like ribonucleoproteins 578 637 IPR010920 -
Gma09g00620 668 MobiDBLite consensus disorder prediction 43 59 - -
Gma09g00620 668 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 13 668 - -
Gma09g00620 668 Pfam Mechanosensitive ion channel 530 661 IPR006685 GO:0016020|GO:0055085
Gma09g00620 668 Gene3D - 588 637 IPR023408 -
Gma09g00620 668 MobiDBLite consensus disorder prediction 22 42 - -
Gma09g00620 668 PIRSF Memb_At2g17000 1 668 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00620 Gma-Chr9 6949692 6952258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00620 87 667 Mechanosensitive Ion Channel Family AT5G12080 53.401 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00620 K22048 - gmx:100777332 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00620 09 6949692 6952258 Gma09g00620 09 6949692 6952258 ECH
Gma15g01636 15 16831311 16834442 Gma09g00620 09 6949692 6952258 GST