Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00604 ATGGATGGATGGTCCTTGGAAGATCTTCTGAGCAAAGTTAAAAAAATTCCAGAGTCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGCATCTTCACCATCAAAAACATATTATCCATAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGAGAGGTAAAGATTACTGACTTTGGTGTAAGTGTAATCATGGAAAACACATCTGGTCAAGCAAATACTTTCGTCGGCACATACAGCTATATGTCTCCAGAGAGAATCATTGGTAACCTGCATGGCTACAACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTACTCAAGTGTGCTACAGGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAATCCAGGGGATAGACCGTCAGCTCTGGACCTTATAAATCATCCTTTTATCAACATTTATGAGGACTTGAATAACTTAGTCTGTTCCAATCCTGGACTTTACCCAAAGATATTACCTAAACTACAAGTAAACGTGGGATGTGCTCGTTTTCAACCTTCTTTCCATACTAATATTCTGGACTATCTGAACAGTGAAAGATATGGCATTCTATGTCAACTTGGCAAATGGAAACTACAACTGTCACTTCATATGTAA 642 0.3816 MDGWSLEDLLSKVKKIPESYLAAICKQVLKGLMHLHHQKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMENTSGQANTFVGTYSYMSPERIIGNLHGYNYKSDIWSLGLILLKCATGILLIYLSMFTENPGDRPSALDLINHPFINIYEDLNNLVCSNPGLYPKILPKLQVNVGCARFQPSFHTNILDYLNSERYGILCQLGKWKLQLSLHM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00604 213 Gene3D Transferase(Phosphotransferase) domain 1 3 158 - -
Gma09g00604 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00604 213 PANTHER MAP KINASE KINASE 1 119 - -
Gma09g00604 213 PANTHER MAP KINASE KINASE 123 153 - -
Gma09g00604 213 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Gma09g00604 213 SMART serkin_6 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00604 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Gma09g00604 213 Pfam Protein kinase domain 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00604 213 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 119 - -
Gma09g00604 213 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 123 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00604 Gma-Chr9 6678852 6680885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00604 1 118 MAP Kinase Kinase Gene Family AT4G29810 74.576 1.08e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gma09g00604 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00604 K20603 - gmx:100789241 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00604 09 6678852 6680885 Gma09g00604 09 6678852 6680885 ECH