Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00603 ATGGAGGAAATAACTTCGACTGTTGCAGTGCCATTCACACTAGAGAATTTAATACAAAAAGAGCCAGCAGTGACAACCCACATGGAGATAACTGGTCTCAAACTCAGGGCAAATACATCACCACCTTTGATATTAAATCCTTCAATTGAAATTGAAAAGCACACAGATATTGGTCCACAACCCCAAATTAAAGCGTCTTCAGAGGGAACGGAGAATCTGGTTGGAGCTGGCCTTGTCTCAGAAATGGTTAGTCAAGGAGACAATAATGGTTTGTATTCTGAAAGTCTAAAGCAGGCAAGAAAAGAGAATGAATCATTGCAAGCTAAGGATTTTCAGTGTGGTGGCAAAATTGGTCCTTGTAGGGAGGAATCTTCTGTTTTGAGGACTAATTGTGAAAGAAATTCACCTATTACCATCAAGGTTGGTGATAACATAATTGATGGAAAGTCCGGTTCGACCAAGCCGCCACGTGCTAGGGAACATGAGAGTGATAATGGAAGTGGACCAGATGAGTCTAATAAGAAAACATTTGCTGTGCCTTGTGCGATGCCAGAGAAGCCAACATGCTTGGAATTGAGTGGTGGTACTAGTACTAATTGTACTACCCCACTTTGGGGTTGTTCATCGGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTGCTGTTAAGCCTCATCTTTTTCAAGTCACTTCAAGGATGGTAAGGGATGATCATGTGAGTGAAAACACAAAATACTCACCAACCCATTTTTTTGGTGTCTATGATGGGCATGGGGGCATTCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCGGTGTTGGTTGATGAGATAGAAGCTGCAGAATCAAGTTTCGATGGAAAGAATGGGAGGGACGGCAACTGGGAGGACCAATGGAAGAAAGCATTCTCCAATTGCTTTCACAAAGTAGATGATGAGGTTGGAGGAGTTGGTGAAGGTAGTGGTGCAAGTGTTGAACCTCTTGCTTCTGAGACTGTTGGCTCCACTGCTGTGGTTGCCATTTTGACTCAAACACACATAATAGTTGCAAATTGTGGAGATTCAAGAGCTGTCTTGTGTCGCGGAAAACAAGCACTGCCTTTGTCTGATGACCACAAACCAAATAGAGACGATGAATGGGAAAGGATAGAAGCTGCAGGAGGAAGGGTTATACAATGGAATGGGTACCGAGTTCTAGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAGCCATGGGTAATTCCAGAGCCAGAAGTGAAGTGTGTCCAAAGAGACAAAAGCGACGAGTGCCTCATTCTAGCCAGTGATGGTTTATGGGATGTCATGACAAACGAAGAAGCCTGCGAAATTGCACGAAAGCGGATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCAGTATCATCAGAACAAGGCCAAGAAGGAGTTGATCCTGCAGCTCAGTATGCTGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGAGGAACCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCTCAGAGAAAAATCAAGAAAAAAGAATAA 1569 0.4334 MEEITSTVAVPFTLENLIQKEPAVTTHMEITGLKLRANTSPPLILNPSIEIEKHTDIGPQPQIKASSEGTENLVGAGLVSEMVSQGDNNGLYSESLKQARKENESLQAKDFQCGGKIGPCREESSVLRTNCERNSPITIKVGDNIIDGKSGSTKPPRAREHESDNGSGPDESNKKTFAVPCAMPEKPTCLELSGGTSTNCTTPLWGCSSVCGRREEMEDAIAVKPHLFQVTSRMVRDDHVSENTKYSPTHFFGVYDGHGGIQVANYCREHLHSVLVDEIEAAESSFDGKNGRDGNWEDQWKKAFSNCFHKVDDEVGGVGEGSGASVEPLASETVGSTAVVAILTQTHIIVANCGDSRAVLCRGKQALPLSDDHKPNRDDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCVQRDKSDECLILASDGLWDVMTNEEACEIARKRILLWHKKNGNNSVSSEQGQEGVDPAAQYAAEYLSRLALQRGTKDNISVIVIDLKPQRKIKKKE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00603 522 Pfam Protein phosphatase 2C 209 505 IPR001932 -
Gma09g00603 522 ProSiteProfiles PPM-type phosphatase domain profile. 204 512 IPR001932 -
Gma09g00603 522 Coils Coil 89 109 - -
Gma09g00603 522 Gene3D - 198 522 IPR036457 -
Gma09g00603 522 SMART PP2C_4 196 510 IPR001932 -
Gma09g00603 522 CDD PP2Cc 206 512 IPR001932 -
Gma09g00603 522 SUPERFAMILY PP2C-like 202 514 IPR036457 -
Gma09g00603 522 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 106 522 - -
Gma09g00603 522 PANTHER ALPHABET, ISOFORM E-RELATED 106 522 - -
Gma09g00603 522 MobiDBLite consensus disorder prediction 153 169 - -
Gma09g00603 522 MobiDBLite consensus disorder prediction 142 176 - -
Gma09g00603 522 ProSitePatterns PPM-type phosphatase domain signature. 251 259 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00603 Gma-Chr9 6675535 6678141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00603 201 521 PP2C-type Phosphatase Gene Family AT4G26080 60.429 2.65e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00603 K14497 - gmx:100803764 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00603 09 6675535 6678141 Gma09g00603 09 6675535 6678141 ECH
Gma15g01614 15 15978733 15981338 Gma09g00603 09 6675535 6678141 GST
Gma17g00496 17 4060218 4063782 Gma09g00603 09 6675535 6678141 PCT
Gma13g00870 13 22916183 22918512 Gma09g00603 09 6675535 6678141 PCT
Gma09g00603 09 6675535 6678141 Gma17g00496 17 4060218 4063782 PCT
Gma09g00603 09 6675535 6678141 Gma13g00870 13 22916183 22918512 PCT