LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g00599	ATGGAGAATCAAAAGGCGGGGGAATCGGTGCATGTGAGGGAGGAGGAGGATGACGTGGCGGTGGAGGAAGAGGAGGAACAACAAGGAGATGTTGATGTTGGTTCCAGCATGACCTTGGAGAGGGTCGCTGCAGCTAAGAAATTCATTGAGAATCATTACAGGTCTCAGAGGAAGCACATCCAAGAACGCAAGGAGAGGCGGTTAATGCTAGAGAAGAAGTTAGCATCTTCTCAAGTACCAGAAGATGAACAGATCAATCTATTGAAGGATTTAGAGCTCAAGGAAACCGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGGCTTTGCCGTGAAAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCGTGTGACTTCATTGTGAAACTCTATTACTCTTTTCAAGATGCTGAACACTTATATCTCATAATGGAATATTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCTGAAAGCGTTATTGCCATAGAGTCTATTCATAAACATAACTACATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACCAATATGGTCACATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAGTCTATCATCTATTAGTGAAAATGAAATCCTGGATGATGAGAACTTGAACGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAACAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCTCCTGAAGTACTACTGAAAAAGGGTTATGGTGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTAGTTGGATATCCTCCGTTTTACTCTGATGATCCTGTATCAACATGCAGAAAGATTGTGCATTGGAAAAATCACTTGAAATTTCCAGAGGAGGTCAGATTGACACCCGAAGCCAAGGATCTAATATGCAGGTTGCTTTCCGGTGTGCCACATAGGCTTGGTACTAGAGGAGCAGAAGAAATTAAAGCTCATCCTTGGTTCAAAGATGTCATGTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAATCAACTAGATCTGGATCTGGACCCTTCAGAAAGAAGCTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGATGCACCAATCTATTAATGGCGATACAGATCCAGGGAGCTTGTCACCAAAACGGACATCTGTGGATTCCACGCAGAGTGATTCTGGAGTAAGCTATTCCGCCTGA	1578	0.4195	MENQKAGESVHVREEEDDVAVEEEEEQQGDVDVGSSMTLERVAAAKKFIENHYRSQRKHIQERKERRLMLEKKLASSQVPEDEQINLLKDLELKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVACDFIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAESVIAIESIHKHNYIHRDIKPDNLLLDQYGHMKLSDFGLCKPLDCSSLSSISENEILDDENLNDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVSTCRKIVHWKNHLKFPEEVRLTPEAKDLICRLLSGVPHRLGTRGAEEIKAHPWFKDVMWDRLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKSTRSGSGPFRKKLLTSQDLSFVGYTYKNFAAVKGMMHQSINGDTDPGSLSPKRTSVDSTQSDSGVSYSA	525

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g00599	525	SMART	serkin_6	111	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma09g00599	525	MobiDBLite	consensus disorder prediction	1	37	-	-
	Gma09g00599	525	PANTHER	SERINE/THREONINE-PROTEIN KINASE	20	524	-	-
	Gma09g00599	525	Gene3D	Phosphorylase Kinase; domain 1	109	190	-	-
	Gma09g00599	525	CDD	STKc_NDR_like	109	483	-	-
	Gma09g00599	525	Gene3D	Phosphorylase Kinase; domain 1	437	447	-	-
	Gma09g00599	525	Gene3D	Transferase(Phosphotransferase) domain 1	314	436	-	-
	Gma09g00599	525	Pfam	Protein kinase domain	113	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma09g00599	525	Pfam	Protein kinase domain	311	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma09g00599	525	ProSitePatterns	Protein kinases ATP-binding region signature.	117	140	IPR017441	GO:0005524
	Gma09g00599	525	SMART	pkinase_C_6	419	484	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Gma09g00599	525	ProSiteProfiles	AGC-kinase C-terminal domain profile.	419	492	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Gma09g00599	525	Gene3D	Transferase(Phosphotransferase) domain 1	191	258	-	-
	Gma09g00599	525	SUPERFAMILY	Protein kinase-like (PK-like)	94	463	IPR011009	-
	Gma09g00599	525	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	230	242	IPR008271	GO:0004672\|GO:0006468
	Gma09g00599	525	MobiDBLite	consensus disorder prediction	1	16	-	-
	Gma09g00599	525	ProSiteProfiles	Protein kinase domain profile.	111	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma09g00599	525	MobiDBLite	consensus disorder prediction	497	525	-	-
	Gma09g00599	525	PANTHER	AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN	20	524	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g00599	Gma-Chr9	6631389	6642079	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g00599	1	502	AGC Kinase Gene Family	AT2G19400	73.663	0.0	766

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Gma09g00599		Pkinase	7.1e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g00599	K08790		-	gmx:100802177	1031.55

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma15g01611	15	15919572	15930273	Gma09g00599	09	6631389	6642079	GST