Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00587 ATGAACTTCAGAAGCGGCTCCTCGGATTCAAAGGACGCCAGTAACAGCAGCACCGGCGAGGCCTATTTGAGCGGCGTTTCGGACGTCATCACGCCGCTGAGGCGCCTCTCGGAGCAGCTCGGGTCAATATTAGATGGCGGGGGGGTTGACTTTTTCTCCGACGCCAAGATCGTGGCCGGAGACGGCCGGGAAGTGGCGGTGAACCGGTGCATTCTGGCGGCCAGGAGCGGCTTCTTCAAGCATGTCTTCGCCGGTGGTGGCGGCTGCGTGCTCCGGCTGAAGGAAGTGGCCAAGGACTACAACGTGGGGTTGGAGGCGCTTGGGATTGTTTTGGCTTATTTGTATAGTGGAAGAGTGAAGCCTTTGCCTCAAGGTGGTGTTTGTGTTTGTGTGGATGATGTGTGTTCACATTTTGGGTGTAGGCCTGCTATTGATTTCTTGCTTCAGCTTCTCTATGCATCCTCCACTTTTCAGCTCAATGATTCAATACAACAACATATTTTGTTTGCCTTTTGCAGCAATGCTGGACATCTACTAGACATTCTTGAAAAGGTGGCAATAGATGATATTTTGGTGGTTCTATCGGTCGCAAATATATGTGGCATAGTGTGTGAAAGACTACTAGCAAGGTGCACTGAGATGATACTTAAATCTGATGCTGATATCACCACTCTTGAAAAGGCACTGCCTCAACATTTGGTGAAGCAAATCACAGATAAACGAATAGAACTGGACCTGTACATGCCCGAAAACTTCAATTTTCCTGACAAACATGTCAACAGAATACACAGGGCACTGGATTCGGACGATGTGGAACTGGTAAGATTGCTTTTGAAAGAGGGACACACAACTCTTGATGATGCTTATGCACTCCACTATGCTGTTGCATACTGTGATGTGAAGACCACCACTGAGCTTCTTGATCTTGGTCTTGCTGATGTGAACCACAAAAACTATAGGGGCTATAGTGTGCTGCATGTTGCTGCAATGAGGAAGGAGCCTAAGATTATAGTTTCTCTCTTGACTAAGGGGGCACAGCCTTCTGATCTCACTTTGGATGGAAGAAAAGCCCTTCAGATTTCGAAACGTCTCACCAAAGCTGTGGATTATTATAAGTCCACAGAGGAAGGAAAAGTTTCATGCAGTGACAGGTTGTGCATAGAGATATTGGAGCAAGCTGAGAGAAGGGAGCCTTTACTTGGAGAGGCATCTCTTTCTCTTGCTATGGCAGGGGATGATTTGCGCATGAAACTGTTGTACCTAGAAAATAGAGTTGGACTGGCGAAAGTGTTGTTTCCCATGGAAGCAAAGGTTATTATGGATATTTCTCAAATTGATGGCACATCTGAGTTTCCATCAACAGACATGTACTGTCCAAATATTAGTGATCACCAGAGGACAACTGTGGACTTAAACGATGCACCTTTCAGAATGAAGGAAGAACATCTAGTTAGGTTGAGAGCACTGTCTAGAACTGTGGAGTTGGGGAAACGCTTCTTCCCTCGATGCTCAGAAGTGTTGAACAAGATCATGGATGCTGATGACCTAACTCAGCTTACATGTATGGGTGATGACAGTCCCGAAGATCGACTAAGGAAGCGAAGAAGGTATGTGGAGCTCCAAGAAGTTCTGAATAAGGTCTTCAATGAGGACAAGGAGGAGTTTGATAGGTCTGCCATGTCATCATCATCCTCTTCTACATCAATTGGAGTAGTGAGACCTAATGCCAATCTAGCCATGAAGAACTAG 1749 0.4631 MNFRSGSSDSKDASNSSTGEAYLSGVSDVITPLRRLSEQLGSILDGGGVDFFSDAKIVAGDGREVAVNRCILAARSGFFKHVFAGGGGCVLRLKEVAKDYNVGLEALGIVLAYLYSGRVKPLPQGGVCVCVDDVCSHFGCRPAIDFLLQLLYASSTFQLNDSIQQHILFAFCSNAGHLLDILEKVAIDDILVVLSVANICGIVCERLLARCTEMILKSDADITTLEKALPQHLVKQITDKRIELDLYMPENFNFPDKHVNRIHRALDSDDVELVRLLLKEGHTTLDDAYALHYAVAYCDVKTTTELLDLGLADVNHKNYRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRKALQISKRLTKAVDYYKSTEEGKVSCSDRLCIEILEQAERREPLLGEASLSLAMAGDDLRMKLLYLENRVGLAKVLFPMEAKVIMDISQIDGTSEFPSTDMYCPNISDHQRTTVDLNDAPFRMKEEHLVRLRALSRTVELGKRFFPRCSEVLNKIMDADDLTQLTCMGDDSPEDRLRKRRRYVELQEVLNKVFNEDKEEFDRSAMSSSSSSTSIGVVRPNANLAMKN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00587 582 PANTHER REGULATORY PROTEIN NPR3 20 580 IPR044292 GO:0009862|GO:2000022|GO:2000031
Gma09g00587 582 ProSiteProfiles BTB domain profile. 53 123 IPR000210 GO:0005515
Gma09g00587 582 Pfam NPR1/NIM1 like defence protein C terminal 362 567 IPR021094 -
Gma09g00587 582 Gene3D Potassium Channel Kv1.1; Chain A 22 175 IPR011333 -
Gma09g00587 582 Pfam BTB/POZ domain 51 121 IPR000210 GO:0005515
Gma09g00587 582 ProSiteProfiles Ankyrin repeat profile. 320 352 IPR002110 GO:0005515
Gma09g00587 582 SMART BTB_4 53 155 IPR000210 GO:0005515
Gma09g00587 582 PANTHER REGULATORY PROTEIN NPR2 20 580 - -
Gma09g00587 582 SMART ANK_2a 286 316 IPR002110 GO:0005515
Gma09g00587 582 SMART ANK_2a 320 349 IPR002110 GO:0005515
Gma09g00587 582 SMART ANK_2a 257 285 IPR002110 GO:0005515
Gma09g00587 582 SUPERFAMILY POZ domain 50 161 IPR011333 -
Gma09g00587 582 Pfam Ankyrin repeats (many copies) 290 334 IPR002110 GO:0005515
Gma09g00587 582 Pfam Domain of unknown function (DUF3420) 221 263 IPR024228 -
Gma09g00587 582 Gene3D - 202 392 IPR036770 -
Gma09g00587 582 SUPERFAMILY Ankyrin repeat 251 362 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00587 Gma-Chr9 6422904 6426119 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma09g00587 NPR1_like_C 2.5e-88 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00587 K14508 - gmx:100800032 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00587 09 6422904 6426119 Gma09g00587 09 6422904 6426119 ECH