Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00579 ATGGCAGTGACATTGTACGACCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGATCAGTACCTTCTCCCACGCACATTGCCAACTGCTCCATCACATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCCTTGTTGAGAATATCTGGTGTTTCTGGTGAGGGATCTCTTGTTGCAGCTCCCCCAACTGCAGACACAAAGGCAACTGGAAAGTCATCTGTTATGTTGGATGTGAAACCTTGGGATGATGAAACTGACATGAAGAAGCTCGAGGAAGCAGTAAGATCTATTGAGATGGAAGGGTTGCTTTTTGGTGCATCAGAATTTACAATCGTGGGACTTGGAGATCAAGGCAACCAGAGGAATTGCAAATTTTAG 384 0.4531 MAVTLYDLSSASGLKKLDQYLLPRTLPTAPSHEYVNVSRWYKHIDALLRISGVSGEGSLVAAPPTADTKATGKSSVMLDVKPWDDETDMKKLEEAVRSIEMEGLLFGASEFTIVGLGDQGNQRNCKF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00579 127 Gene3D - 67 126 IPR014717 -
Gma09g00579 127 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 27 61 - -
Gma09g00579 127 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 67 117 - -
Gma09g00579 127 SUPERFAMILY eEF-1beta-like 70 116 IPR036219 -
Gma09g00579 127 CDD EF1B 72 117 IPR014038 GO:0003746|GO:0006414
Gma09g00579 127 Pfam EF-1 guanine nucleotide exchange domain 75 117 IPR014038 GO:0003746|GO:0006414
Gma09g00579 127 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 27 61 - -
Gma09g00579 127 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 67 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00579 Gma-Chr9 6279412 6280803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00579 7 125 Eukaryotic Initiation Factors Gene Family AT2G18110 42.328 8.12e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00579 K03232 - gmx:100797389 204.912