Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00574 ATGGGAGTGGTTTTGGCACTGATTCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGTTGTGGAATTCCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCATCCTAGTGGAGAAGCACCTGCTCCTATCCATCATGGACTGTCATGGGAAAGCAGTCCTCCAAAATCACCTTCAGATCCAAATGAATTTGGTATATCCCCATCTAATGAAATCATACCTGTGGATCCTTCCCCCAGTGAACCACCTGGTACTTTACACCCAAGAGAACCATGGAGAACTATTGCACCAATCCCTCCAGAAGTACCAAATGGGTCATTCTTGCCCCCTCCAGTTACTACATTACCACCTCCAACATCAGCTCCAACTCCTCAGAAGGTAAAAGGATTTGAACCATCTATATCTCCTAGTCCTAGTACAAGCACCATAGCATCATCACCACCAGCACCATATAATGCTGCTCATGCACCATCAACTTCTGAAGGGAGTGTGCCACCATCCATACAACCAAGTCCACCTCAAAGCAAAACAACACCTGCTATTAGGCCTCCTGTGTCCACACCAATTGCTCCAGCTCCAATTGCAATAACTTCTGGCAATTTGCCAAAAACTTCACCTGTCAGCCAGCCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCAGAGCCAGCTTTGCCAGCACTAGTTCCAATACCATCTACCATATTACCCAAAATTTCACCTGTAAGCCAACCAACTGAAAACGGAAGTTTGCCTCATAGAGAGGGTGCAAATAATGGTCACATTTCAGAGCCAATTTCACCAGCCCCTACAGTATTCAGTTTTCCTGAACACTCGCCAGAGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTCCCCAGAAGGAATATCAACACTGGTCGCACACTGGAGCCAGTTTCACAAGCCCCAGTTGCAACAGCTCCTGCAATTTTGCCAAAAAATTCATCAGTCAGTCAACCTACTCATCATGGAAATTCCCCACCTGATGTTCAAAATAGAACAGCAAATAATGGTCACAGTCACACCCCAGCACCAGAAATGCCACCATCAGTTACACCACCACGTCCATTTCCAGTAGATCCTCCATTGGTCCACCCAGTCATACCAGCAGCACCTCCACCAAAATCACCAGCACCTGGTGGAGAACCAGTTTCTGCACCTGTGTACAAAACACCAAAGCCACCATCAGCTATAGTGCATTTCCATGCTCAAGCACCTGTTGTCTCTCCTGTATCAACACCTTCTAGAAGCTTCAATTGGACCAAAGGTGGAGAACCAGTTTCTGCACCTCCATACAAAACACCAAAACCACTACCAGTTATAGTACATTCCCCTGCTCAAGCTCCTTCTTCTGCACACAAAGCAAGACAATTTCACCATGCTCCTGAGCCACCGATTTCATCTCCTGAATCTCCTTTCAACAAAGATCATCCTCCTGCGTCTTCACCTTCAACCACATTTTATAAGCATCACCATACAAGGAACACAGTCACCAGCCCTGCTCCTGCATCATCACATTCTATTTCTCCTTCCACTTCAAAACACCAAGATGGATCAAATCCTCCCTTGCCGCTTCCAACAAGTAGGCAAAGACATCATGCTCCACCACCAATGAACACAGGTTCCTCAGTTTCCCCATCTGGCCTCCCTATTCAGTCACCAGTGAGCCAAGTTTCACCTGCTCCTTCTCCGCTATTCAAAATATCCCCCCACTCAACCAAAATTCCATTGCCTCCTCCTAAAGTGTCTCCTTCTCGGCCTTCTTCCAAGACCCCTAAGAAGCCAGTTCGGCCTCGTTTTCAAGCACTGCCACCCCCACCTCCAAATGAAGATTGTATATCTCTGGTTTGCTCAGATCCCTATACAAGTACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCGGTCTTCGCCTTAGTGTTTCTCTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCAAACCAGCAACCTGATAAAACTATTGTATTCGTTGATTTGGTACCACTTGGGGAAGAATTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAAGTTGTTATAAAGACTTCTTACTTTGGTGATTATGACGTGTTATATGTGACCTATCCAGGTTTGCCTCCATCTCCTCCTTTACCTCCTTCAAGCATTTCCATAATCGATGGTGGTCCGTATTCGGGTGGTGGCAATAATGGTAGGACAATAAAACCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATAATTGCTATTATTGCTCTTTCAGTTTTTCTAGTAGTTGTTTTATGCTTTGTTGCTGCTTTGGCATTGTTCAAGTACAGAGATCATGTGAGTCAACCACCATCAACCCCACGGGTTTTACCTCCTCTTACCAAAGCACCAGGTGCTGCTGGATCAGTAGTTGGAGGTGGGCTTGCTTCAGCTTCGACATCATTTCGATCTAACATTGCTGCTTACACAGGATCTGctaagactttcagcatgaatgacattgagaaagccacagataatttccatgcttccagagtacttggagaaggtggttttgggcttgtttatagtggtacacttgaagatgggacaaaagtcgcagtcaaggttctaaaaagagaggatcatcatggcgaccgtgaattcctatctgaagttgagatgcttagccgccttcaccatagaaacttggttaagttgattggtatatgcgcagaggtcagcttccgctgtctagtttatgaactcattccaaatggcagtgtggaatcccatttacatgGAGTTGACAAGGAAAACAGCCCACTTGATTGGAGTGCTCGGTTAAAGATAGCTCTCGGTTCtgctcgtggactggcttatctacatgaagattcaagtccccatgtcatacatagggacttcaagtcgagcaatatcttgctggaaaatgattttacaccaaaagtatcggattttggattggcccgaaCAGCAGCTGATGAGGGGAACAGACACATATCAACACGAGTGATGGGAACTTTCGGTTATGTGGCTCCGGAGTATGCAATGACGGGACATCTTCTTGTgaagagtgatgtttacagctatggtgttgtcctccttgagcttttgaccggaagaaaaccagtaGACATGTCACGACCTCCCGGTCAAGAAAATCTCGTTGCATGGGCTCGTCCATTACTCTCAAGCGAAGAAGGATTGGAAGCAATGATAGATCCATCTCTAGGACATGATGTGCCTTCTGATAGTGTGGCTAAGGTTGCAGCCATTGCTTCAATGTGTGTACAGCCAGAGGTGTCGGACCGTCCCTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTTGTGTGCAATGAATGTGATGAGGCAAGAGAAGCAGGTTCTAGCTCTAGTTCTGTTGATTTAAGTCACTCTAGACAACCATCAGATAATTTACAAGGCCAATTCTCAGCCACCAACTATGATTCTGGAATTGATATTGAAAATGGGTTGTTAGCATCAGAGTTATTCAGCTCATCGGCGAGATATGGAAGGCGAGTGTCCGGATCGTTTAGAAGGCATTCTTATTCAGGTCCTCTGAATACTGGAAGAAGCAAGCGGTTGTGGCAGATAATTAGAAAGCTTTCTGGCGGTAGTATCAGTGAACATGGAACTATGTTTAAGTTATGA 3846 0.3978 MGVVLALILQLVKLCIIGFVVEFQGSEGSVISPSPAFLPVIHPSGEAPAPIHHGLSWESSPPKSPSDPNEFGISPSNEIIPVDPSPSEPPGTLHPREPWRTIAPIPPEVPNGSFLPPPVTTLPPPTSAPTPQKVKGFEPSISPSPSTSTIASSPPAPYNAAHAPSTSEGSVPPSIQPSPPQSKTTPAIRPPVSTPIAPAPIAITSGNLPKTSPVSQPIEHGSLPPKIDERNKSHKPEPALPALVPIPSTILPKISPVSQPTENGSLPHREGANNGHISEPISPAPTVFSFPEHSPESQPTEHGSLPPTVPRRNINTGRTLEPVSQAPVATAPAILPKNSSVSQPTHHGNSPPDVQNRTANNGHSHTPAPEMPPSVTPPRPFPVDPPLVHPVIPAAPPPKSPAPGGEPVSAPVYKTPKPPSAIVHFHAQAPVVSPVSTPSRSFNWTKGGEPVSAPPYKTPKPLPVIVHSPAQAPSSAHKARQFHHAPEPPISSPESPFNKDHPPASSPSTTFYKHHHTRNTVTSPAPASSHSISPSTSKHQDGSNPPLPLPTSRQRHHAPPPMNTGSSVSPSGLPIQSPVSQVSPAPSPLFKISPHSTKIPLPPPKVSPSRPSSKTPKKPVRPRFQALPPPPPNEDCISLVCSDPYTSTPPGAPCKCVWPMKVGLRLSVSLYTFFPLVSEFASEIATGVFMKQSQVRIMGADAANQQPDKTIVFVDLVPLGEEFDNTTAFLTSERFWHKQVVIKTSYFGDYDVLYVTYPGLPPSPPLPPSSISIIDGGPYSGGGNNGRTIKPLGVDISKRQHKGGLSKGIIAIIALSVFLVVVLCFVAALALFKYRDHVSQPPSTPRVLPPLTKAPGAAGSVVGGGLASASTSFRSNIAAYTGSAKTFSMNDIEKATDNFHASRVLGEGGFGLVYSGTLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICAEVSFRCLVYELIPNGSVESHLHGVDKENSPLDWSARLKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEGNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPPGQENLVAWARPLLSSEEGLEAMIDPSLGHDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSSSVDLSHSRQPSDNLQGQFSATNYDSGIDIENGLLASELFSSSARYGRRVSGSFRRHSYSGPLNTGRSKRLWQIIRKLSGGSISEHGTMFKL 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00574 1281 MobiDBLite consensus disorder prediction 291 323 - -
Gma09g00574 1281 ProSitePatterns Protein kinases ATP-binding region signature. 905 927 IPR017441 GO:0005524
Gma09g00574 1281 MobiDBLite consensus disorder prediction 137 172 - -
Gma09g00574 1281 PANTHER OS01G0750732 PROTEIN 7 77 - -
Gma09g00574 1281 PANTHER OS01G0750732 PROTEIN 444 1281 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 370 405 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 557 587 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 442 630 - -
Gma09g00574 1281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Gma09g00574 1281 MobiDBLite consensus disorder prediction 211 409 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 1186 1206 - -
Gma09g00574 1281 SUPERFAMILY Protein kinase-like (PK-like) 880 1172 IPR011009 -
Gma09g00574 1281 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 444 1281 - -
Gma09g00574 1281 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 77 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 173 191 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 252 268 - -
Gma09g00574 1281 Gene3D Phosphorylase Kinase; domain 1 870 974 - -
Gma09g00574 1281 Pfam Protein tyrosine and serine/threonine kinase 901 1172 IPR001245 GO:0004672|GO:0006468
Gma09g00574 1281 Gene3D Transferase(Phosphotransferase) domain 1 975 1196 - -
Gma09g00574 1281 ProSiteProfiles Protein kinase domain profile. 899 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00574 1281 MobiDBLite consensus disorder prediction 335 367 - -
Gma09g00574 1281 CDD STKc_IRAK 905 1173 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 124 191 - -
Gma09g00574 1281 MobiDBLite consensus disorder prediction 498 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00574 Gma-Chr9 6184541 6194712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00574 357 1277 Receptor kinase-like Gene Family AT5G56890 55.151 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma09g00574 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00574 - - gmx:100802309 2138.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00574 09 6184541 6194712 Gma09g00574 09 6184541 6194712 ECH
Gma15g01586 15 15454514 15463925 Gma09g00574 09 6184541 6194712 GST