Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00567 ATGCTGAATGCTATGCAATGGCCTAGTCACGGCAGAACGAGGCTTGGGTTGCAGAGGCACAAGAGGGTGAGCGAGGGGAGAAGGGCTGAAGTTGAACCACCAAGTTTACTTTCCTCCCCAACAATGCCTCTTCGAGTACTCCAAGCAGAAGTTACTTCACCCTCTAATGAGTCACATGCACCACCGCACCAATCCGAATCATTGTTTTACATCCTCGGAGGAATAGTTGTGCTGGCCATAGTGTTGATTTTTTTGTATGTAGTTCGCAAGCGAATTAAACGGCCAGCACAGATGATGACAGTTGCAACTAATGAGAAGCAAGAGTTTGGGGGACACAATGAATCGGCAGAGGTGATGAAGATGATATTTTCATCTAATCAACACTCAGGATCAAAGGAGTTCTTTAGTGGGAACCTTCGGACTATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCAGGAATTTCCATCCTGATAACCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAAAGTTGGTAGATGAAAGGCTAGTTGCTGTTAAGAAATTGGCTCTAAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCGTAGATGGGCCTCAAAGGTTACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACCTCTTTATACATGGGAACAGTGATCAATTTCTGAATTGGAGCACAAGGTTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCCAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCATCCAAGGATTGGAGACTTTGGGCTAGCTAGATTTTTCCCTGAAGACCAAGCTTATCTTAGCACACAGTTCGCTGGAACTTTAGGTTATACAGCTCCTGAATACGCTATTAGAGGAGAGTTGTCAGAAAAGGCAGATATCTATAGTTTTGGAGTTCTGGTGCTTGAAATAATATGTTGCAGGAAAAACACAGAGCATACTTTGCCATCAGAAATGCAGTACCTCCCAGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATTGTAGATCCAAAGCTGAGACAACATGGATTCGTAGAAAAGGATGTCATGCAAGCAATCCATGTGGCTTTCTTATGCCTGCAGCCTCATGCACATTTGAGGCCTCCCATGTCAGAGATCGTGGCATTGCTGACATTCAAAATAGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCAAAGGCCGAGAGAGGATGGTGAGAACCATCCTTTGGAAGCATTATCCCAGGGTTTCACATCTCCCATTTATGTAAAAGCATCTGATTGA 1425 0.4358 MLNAMQWPSHGRTRLGLQRHKRVSEGRRAEVEPPSLLSSPTMPLRVLQAEVTSPSNESHAPPHQSESLFYILGGIVVLAIVLIFLYVVRKRIKRPAQMMTVATNEKQEFGGHNESAEVMKMIFSSNQHSGSKEFFSGNLRTISCFDYQTLKKATRNFHPDNLLGSGGFGPVYQGKLVDERLVAVKKLALNKSQQGEKEFLVEVRTITSIQHKNLVRLLGCCVDGPQRLLVYEYMKNRSLDLFIHGNSDQFLNWSTRFQIILGVARGLQYLHEDSHPRIVHRDIKASNILLDDKFHPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTEHTLPSEMQYLPEYAWKLYENARILDIVDPKLRQHGFVEKDVMQAIHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDQRPREDGENHPLEALSQGFTSPIYVKASD 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00567 474 PANTHER RECEPTOR-LIKE KINASE 136 442 - -
Gma09g00567 474 CDD STKc_IRAK 163 429 - -
Gma09g00567 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Gma09g00567 474 MobiDBLite consensus disorder prediction 1 35 - -
Gma09g00567 474 SMART serkin_6 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00567 474 Gene3D Transferase(Phosphotransferase) domain 1 234 437 - -
Gma09g00567 474 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 136 442 - -
Gma09g00567 474 Pfam Protein tyrosine and serine/threonine kinase 161 426 IPR001245 GO:0004672|GO:0006468
Gma09g00567 474 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00567 474 SUPERFAMILY Protein kinase-like (PK-like) 137 431 IPR011009 -
Gma09g00567 474 Gene3D Phosphorylase Kinase; domain 1 126 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00567 Gma-Chr9 6075748 6081152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00567 145 451 Receptor kinase-like Gene Family AT1G56120 47.883 5.74e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma09g00567 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00567 - - gmx:100791042 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00567 09 6075748 6081152 Gma09g00567 09 6075748 6081152 ECH
Gma15g01575 15 15275586 15280942 Gma09g00567 09 6075748 6081152 GST
Gma17g00529 17 4341851 4345039 Gma09g00567 09 6075748 6081152 PCT
Gma09g00567 09 6075748 6081152 Gma17g00529 17 4341851 4345039 PCT