Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00566 ATGGAAGATGATGAGGCATGCATCACGAGTCTGAGCCTTGGACTTGGAATAATGGGAGGGCATGCTCAAAAGAAGGAGAATAAGCAGAAAGTTCATTGCTTGGACCTATCCTTTGAGCTTTGTTCAAAAGGGAAAGAAGAAGTAGAAGAAGCCATTGACGTGGATCAACAACAACAACAACAACATGCTAATAAGGCAAAAGGGTTGTTGTGTTTGAAGCACCCTAATGATGAAACAAGCCCTGATAGCAACAATAGCAATAACGGTAGCAGAAAGAAACTGAAGCTCACAAAGGAGCAATCAGCCACCCTTGAAGATATTTTCAAGCTGCATAGCACTCTTAACCCCGCACAGAAACAGGCACTTGCTGAGCAATTGAATTTAAAGCATAGACAGGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAGCAAACAGAGGTGGATTGCGAGTTCCTGAAGAAATGTTGTGAGAAACTAACAGATGAAAATCAAAGGCTGAAGAAGGAGTTGCAAGAGCTGCGTGCACAAAAGATTGGACCAACACCATTATACATTCAACTCTCCAAGGCCACAACCTTGACCATTTGTTCATCTTGTGAGAAACTGTTGAAGCCAAATGAAGGGAACAACAAAGGAGCCATTTCCAATGTGATCCGAAACAGTAGCAACAAATTGAAGAACAGCATAGAGTTAGGGGGTATCTAG 717 0.424 MEDDEACITSLSLGLGIMGGHAQKKENKQKVHCLDLSFELCSKGKEEVEEAIDVDQQQQQQHANKAKGLLCLKHPNDETSPDSNNSNNGSRKKLKLTKEQSATLEDIFKLHSTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCEKLTDENQRLKKELQELRAQKIGPTPLYIQLSKATTLTICSSCEKLLKPNEGNNKGAISNVIRNSSNKLKNSIELGGI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00566 238 MobiDBLite consensus disorder prediction 77 91 - -
Gma09g00566 238 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Gma09g00566 238 MobiDBLite consensus disorder prediction 72 96 - -
Gma09g00566 238 SUPERFAMILY Homeodomain-like 78 148 IPR009057 -
Gma09g00566 238 Pfam Homeodomain 91 145 IPR001356 GO:0003677
Gma09g00566 238 PANTHER - 21 230 - -
Gma09g00566 238 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 21 230 - -
Gma09g00566 238 Coils Coil 146 180 - -
Gma09g00566 238 Pfam Homeobox associated leucine zipper 147 180 IPR003106 GO:0006355|GO:0043565
Gma09g00566 238 Gene3D - 70 146 - -
Gma09g00566 238 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Gma09g00566 238 SMART HOX_1 89 151 IPR001356 GO:0003677
Gma09g00566 238 CDD homeodomain 91 148 IPR001356 GO:0003677
Gma09g00566 238 SMART halz 147 190 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00566 Gma-Chr9 6060050 6061297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00566 90 223 Homeobox Transcription Factor Family AT4G37790 65.734 2.76e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma09g00566 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00566 K09338 - gmx:100790522 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01572 15 15220272 15221840 Gma09g00566 09 6060050 6061297 GST
Gma17g00532 17 4365908 4367271 Gma09g00566 09 6060050 6061297 PCT
Gma13g00828 13 22575832 22577358 Gma09g00566 09 6060050 6061297 PCT
Gma09g00566 09 6060050 6061297 Gma17g00532 17 4365908 4367271 PCT
Gma09g00566 09 6060050 6061297 Gma13g00828 13 22575832 22577358 PCT