Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00511 ATGGAAGATACTAGCTTCTTTGTGATCTTATCATCCTTTCTGCTTCTCATAGTTAGTACACAAACAATCTCAGCTCAACTTACTCGTGGCTTCTATCGAAACACGTGCCCCAATGTGGAACAGTTGGTTCGTTCAGCTGTGGAGCAGAAGTTCCAGCAAACCTTTGTGACTGCCCCTGCCACTCTTAGACTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCCATTTTGCTTGCATCTCCAAACAACAAGGCAGAGAAAAATCATCCTGATGACATTTCACTAGCTGGTGATGGCTTTGACACAGTTGTTAAAGCCAAGGCAGCGGTTGATAGTGACCCTCAATGCAGAAACAAAGTCTCTTGTGCTGATATTCTTGCTCTGGCTACTAGAGATGTGAtaaatttgGCTGGGGGACCATTTTATGAAGTTGAATTGGGAAGGCTTGACGGAAGAATATCTACTATTGCTAGTGTTCAACGCCAGCTTCCTCACCCTGATTTCAATTTAGATAAGCTCAATTCCATGTTTAGCTTCCATGGCCTCACAAAGACAGATATGATTGCCTTATCAGGTGCGCATACAATTGGATTCTCTCACTGCAACCACTTCTCAAGACGGATCTACAACTTCAGCCCCCAAAAATTAATTGACCCAACACTTAACTTACAATATGCCTTCCAACTTAGACAGGCTTGCCCTCTCAGAGTTGATTCTAGAATTGCCATAAACATGGACCCTGTCACACCTGAAAAGTTTGACAACCAATACTTCAAGAATCTCCAGCAAGGAATGGGCCTATTCACTTCTGATCAGGTGCTGGCTACAGATGAAAGGTCAAGGGGCACAGTCAACTTATTTGCATCAAATGAACAAGCTTTTAACAAAGCTTTTATTGAAGCTATTACTAAAATGGGAAGGATAGGTGTTAAAACAGGTAGACAAGGGGAAATAAGGTTTGATTGCTCCAGGGTGAACTGA 987 0.4245 MEDTSFFVILSSFLLLIVSTQTISAQLTRGFYRNTCPNVEQLVRSAVEQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPNNKAEKNHPDDISLAGDGFDTVVKAKAAVDSDPQCRNKVSCADILALATRDVINLAGGPFYEVELGRLDGRISTIASVQRQLPHPDFNLDKLNSMFSFHGLTKTDMIALSGAHTIGFSHCNHFSRRIYNFSPQKLIDPTLNLQYAFQLRQACPLRVDSRIAINMDPVTPEKFDNQYFKNLQQGMGLFTSDQVLATDERSRGTVNLFASNEQAFNKAFIEAITKMGRIGVKTGRQGEIRFDCSRVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00511 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 Pfam Peroxidase 43 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 Gene3D Peroxidase, domain 2 166 307 - -
Gma09g00511 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gma09g00511 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gma09g00511 328 Gene3D - 30 328 - -
Gma09g00511 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 PANTHER - 10 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma09g00511 328 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Gma09g00511 328 PANTHER PEROXIDASE 16-RELATED 10 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00511 Gma-Chr9 5281780 5285182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00511 1 328 Peroxidase AT2G18980 72.866 7.30e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00511 K00430 - gmx:100808542 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01521 15 14203122 14212954 Gma09g00511 09 5281780 5285182 GST
Gma17g00577 17 4781388 4783665 Gma09g00511 09 5281780 5285182 PCT
Gma13g00788 13 22141678 22143613 Gma09g00511 09 5281780 5285182 PCT
Gma09g00511 09 5281780 5285182 Gma17g00577 17 4781388 4783665 PCT
Gma09g00511 09 5281780 5285182 Gma13g00788 13 22141678 22143613 PCT