Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00506 ATGATGCAGGCCACCTCAACATGGCAAGTACATAGGCGTTGGGACCCCCAAATTGGAGGGTATATAAAGAGAGGCATATATAGAGGTGCCTCTTTTGTCTTTGCTGAACAAGAAAACATGGCTGGGGACAAGGGAACCATCACTCTTGAAGAGATCAAGAACGAGACAGTTGATCTGGAACGTATTCCAATTGATGAAGTGTTCGAGCAACTGAAATGTACCAGGGAAGGTTTGTCCTCCACGGAAGGAGAAAACCGGCTTCAAATATTTGGACCCAACAAATTAGAAGAGAAGAAGGAAAGCAAGTTTCTCAAGTTTCTCGGGTTCATGTGGAATCCACTTTCATGGGTCATGGAGGCTGCGGCTATTATGGCCATTGCTCTTGCAAACGGCGAAGGGAAGCCTCCGGATTGGCAAGATTTCGTTGGTATTGTTTGCTTGTTGCTGATCAACTCCACTATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAGACAAAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAAGCTGCAATTCTAGTCCCTGGAGACATCATAAGCATCAAGCTAGGTGACATTATCCCTGCCGATGCTCGTCTTCTTGAAGGTGATCCACTGATGGTTGATCAAGCAGCTCTGACTGGAGAATCCCTTCCTGTGACCAAGCATCCAGGGCAAGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATCGAAGCCGTCGTGATTGCAACTGGTGTGCACACATTCTTTGGAAAGGCAGCACATCTGGTGGATAGCACGAACCAAGTTGGACATTTCCAGAAGGTTCTTACAGCAATTGGAAACTTCTGTATTTGCTCCATCGCGATCGGTATGTTAGCTGAGATTATAGTGATGTACCCGATTCAGCACCGCAAGTACAGGGAAGGAATTGACAACCTGTTGGTGCTCTTGATTGGAGGAATTCCCATTGCTATGCCTACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTTTCCCAACAAGGTGCCATCACTAAGAGAATGACTGCTATTGAAGAAATGGCAGGCATGGATGTCCTTTGCAGTGACAAGACAGGAACACTCACCCTCAACAAACTCACTGTTGACAAGAACTTGGTTGAGGTCTTTGCAAAGGGTGTGGACAAGGATCATGTGATCCTTCTTGCTGCCAGGGCTGCCAGGACTGAAAACCAGGATGCCATTGATGCTGCCATTGTGGGAATGCTTGCTGATCCTAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCACTTTCTACCATTCAATCCTGTTGACAAGAGGACTGCTTTGACTTACATTGATGCTAATGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATGTCCCTGTGTAACCTCAGGGATGATGCTAAGAAGAAGGTTCATGCTATTATTGACAAGTTTGCTGAAAGAGGGCTTCGTTCACTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAAACAAAAGAAAGTGCTGGTGCTCCATGGCAGTTTGTTGGTCTGTTGTCACTGTTTGATCCCCCTAGGCATGATAGTGCTGAAACCATTCGCCGAGCTCTTAACCTTGGTGTAAATGTTAAGATGATTACAGGTGATCAACTTGCCATAGCTAAGGAAACAGGAAGGAGACTTGGAATGGGAACAAATATGTATCCATCTGCTTCATTGCTTGGTCAAGACAAAGATGCAAGTATTGCCGCACTTCCCGTAGAAGAGCTGATTGAGAAGGCAGATGGATTTGCTGGAGTTTTTCCAGAGCACAAATATGAAATTGTAAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGAGATGGTGTCAACGATGCTCCTGCGTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCTACTGATGCGGCAAGAAGTGCTTCTGACATTGTCTTGACAGAACCTGGATTGAGCGTTATTATTAGTGCAGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAGAACTACACCATCTATGCAGTATCTATCACAATCCGTATAGTGTTTGGCTTCATGTTTATTGCACTGATCTGGAAATTTGACTTCTCACCCTTCATGGTTTTGATTATTGCCATTCTGAATGATGGAACAATCATGACAATTTCAAAGGACAGGGTTAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGAATGAAATCTTTGCTACTGGGGTTGTGCTTGGAGGTTACTTGGCACTGATGACTGTTATATTCTTCTGGGCAATCAAAGAGACGACATTCTTCCCCGACAAATTTGGAGTTAGACCAATTCATGACAATCCAGATGAAATGACTGCTGCTTTGTATCTACAAGTCAGTATAGTTAGCCAGGCTTTGATATTTGTCACCCGTTCGCGCAGCTGGTCCTTCATCGAACGCCCTGGATTGCTGTTAGTGACTGCTTTCGTTATTGCTCAGCTGATTGCTACAGTAATAGCAGTGTATGCCAACTGGGGCTTTGCAAGGATCCAAGGAATTGGTTGGGGTTGGGCAGGAGTGATTTGGCTCTACAGTATTGTCTTCTATTTCCCACTTGACATCATGAAGTTCGCCATCCGCTACATTTTGAGTGGCAAAGCATGGAACAATCTCCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTCTTGCTCAGAGGACCCTGCATGGACTTCAACCACCAGAAACTTCTAATATCTTCAACGAAAAGAGCAGTTATAGAGAACTCACTGAGATTGCTGAGCAGGCCAAGAGGAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAGGGTCTGGACATTGACACAATCCAGCAGCATTACACCGTGTAA 2985 0.4523 MMQATSTWQVHRRWDPQIGGYIKRGIYRGASFVFAEQENMAGDKGTITLEEIKNETVDLERIPIDEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLAEIIVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKDHVILLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDANGNWHRASKGAPEQIMSLCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGGYLALMTVIFFWAIKETTFFPDKFGVRPIHDNPDEMTAALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFVIAQLIATVIAVYANWGFARIQGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNIFNEKSSYRELTEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00506 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 144 392 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 606 720 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 Pfam Cation transporter/ATPase, N-terminus 62 124 IPR004014 -
Gma09g00506 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 890 IPR023298 -
Gma09g00506 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 374 380 IPR018303 -
Gma09g00506 994 SUPERFAMILY HAD-like 368 678 IPR036412 -
Gma09g00506 994 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 77 849 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma09g00506 994 Pfam haloacid dehalogenase-like hydrolase 368 645 - -
Gma09g00506 994 Pfam E1-E2 ATPase 174 351 - -
Gma09g00506 994 SFLD p-type atpase 354 682 IPR044492 -
Gma09g00506 994 PANTHER PLASMA MEMBRANE ATPASE 41 974 - -
Gma09g00506 994 SUPERFAMILY Calcium ATPase, transduction domain A 175 272 IPR008250 -
Gma09g00506 994 Gene3D - 175 259 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 372 386 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 222 236 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 654 666 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 526 537 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 548 558 - -
Gma09g00506 994 PRINTS P-type cation-transporting ATPase superfamily signature 631 650 - -
Gma09g00506 994 SMART Cation_ATPase_N_a_2 58 130 IPR004014 -
Gma09g00506 994 PRINTS H+-transporting ATPase (proton pump) signature 488 506 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 PRINTS H+-transporting ATPase (proton pump) signature 803 824 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 PRINTS H+-transporting ATPase (proton pump) signature 603 619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 PRINTS H+-transporting ATPase (proton pump) signature 631 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 PRINTS H+-transporting ATPase (proton pump) signature 662 687 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00506 994 PANTHER CALCIUM-TRANSPORTING ATPASE 41 974 - -
Gma09g00506 994 Gene3D - 384 531 IPR023299 GO:0000166
Gma09g00506 994 Gene3D - 369 668 IPR023214 -
Gma09g00506 994 CDD P-type_ATPase_H 77 884 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma09g00506 994 Coils Coil 945 965 - -
Gma09g00506 994 Gene3D - 943 994 - -
Gma09g00506 994 Gene3D - 137 858 - -
Gma09g00506 994 SFLD Haloacid Dehalogenase 354 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00506 Gma-Chr9 5173411 5182364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00506 48 994 Primary Pumps ATPases AT4G30190 85.102 0.0 1652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00506 K01535 - gmx:100806580 1831.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01514 15 14102086 14110270 Gma09g00506 09 5173411 5182364 GST
Gma17g00581 17 4811538 4818412 Gma09g00506 09 5173411 5182364 PCT
Gma13g00784 13 22103810 22111561 Gma09g00506 09 5173411 5182364 PCT
Gma09g00506 09 5173411 5182364 Gma17g00581 17 4811538 4818412 PCT
Gma09g00506 09 5173411 5182364 Gma13g00784 13 22103810 22111561 PCT