Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00503 ATGGAGTGGGACAGCAATTCCGATCTCAGCGACGACGAGGCCGTTTCGTTTATGTTAAACGACGACGATGATGACGCCGTTGGACCCCTACCCTTCCCCGTTCTCCAAACGGCGCCGTGCGGCTTCGTCGTCACCGACGCCGTCGAGCCCGACCACCCCATCATATACGTCAACGCCGTCTTCGAGATGGTCACCGGATACCGCGCCGAAGAAGTGCTCGGTCGCAACTGCCGTTTCTTGCAGTGTCGAGGTCCATTTGCTAAGAGAAGGCATCCATTGGTGGACTCAACTGTTGTTTCAGAGATCAGAAGATGCCTTGACGAAGGGGTTGAATTCCAAGATGAGATAACTCATGTCATCGGAATCCAGTTCTTTACAGAGGCAAACATTGATCTTGGTCCCCTTCCGGGTTCTACAATTAAAGAATCTACTAAATCATCAGATCGGTTTCATTCTGTGCTTTCTTCGTTGAATCCTGTTCCAGTGGGGGATCGCAATGTTACTCGTGGAATTTGTGGGATATTTCAATTAAGTGACGAGGTATTGTCTCTCAAGATACTTGCTCGTTTAACTCCAAGAGATATTGCATCAGTTGGTTCTGTTTGTAGGCATTTGTATGAGCTAACAAAAAATGAAGACCTTTGGAGAATGGTGTGCCAAAATGCTTGGGGCAGTGAGACTACACGTGTTTTAGAGACCGTGCCTGGTGCAAGGAGGCTTGGATGGGGTCGGCTGGCAAGAGAACTGACCACCCTTGAAGCAGCAGCATGGAGGAAACTGACTGTTGGAGGTGCTGTTGAACCTTCACGCTGTAATTTTAGTGCTTGTGCAGTTGGTAATAGAGTCGTCCTATTTGGTGGTGAAGGGGTTAACATGCAACCTATGAATGATACCTTTGTATTGGATCTCAATTCTAGTAATCCTGAGTGGCAACATGTCCAGGTCAGTTCTCCTCCCCCTGGTCGGTGGGGCCACACACTTTCTTGTGTTAATGGTTCTCGTTTGGTTGTATTTGGAGGGTGTGGAACGCAGGGCTTGCTCAATGATGTGTTTGTTCTGGACCTGGATGCAAAGCCTCCAACTTGGCGTGAAATTTCTGGATTGGCACCTCCACTTCCGAGATCATGGCATAGCTCCTGTACTCTTGATGGTACCAAGTTGATAGTTTCTGGTGGCTGTGCTGATTCTGGGGTACTCTTGAGTGATACTTTCCTCCTTGATCTGTCAATGGAGAAACCTGTCTGGAGAGAGATACCAGTGGCATGGACTCCACCTTCGCGTCTGGGTCACACACTATCCGTTTATGGTGGCAGAAAAATACTGATGTTTGGGGGTCTGGCCAAGAGTGGGGCCCTGCGTTTTCGCTCCAGTGATGTGTTCACGATGGATTTAAGTGAGGAGGAGCCATGCTGGAGATGTGTAACAGGGAGTGGATTGCCAGGATTGCCAGGTACTGGAAATCCTGGAGGCATAGCTCCTCCTCCTAGACTTGATCATGTGGCTGTCAGCCTTCCCGGTGGGAGAATTCTGATATTTGGTGGGTCTGTTGCGGGCCTTCATTCTGCCTCCCAGCTTTACATACTAGATCCTACTGATGAGAAGCCTACATGGAGAATCCTTAATGTACCTGGGCGCCCTCCAAGATTTGCTTGGGGACATAGTACATGTGTTGTTGGAGGGACAAGAGCTATTGTAATGGGTGGTCAAACTGGGGAGGAATGGATGCTAAGTGAACTCCATGAACTTTCCTTGGCAAGCGGAAAAGTTGCCGCGCTAGTGGTGATAAGTATTTTGATTTGGTCAATGCCTGAGAATGCTTCGGATAGCTCGTCGGCTTCTTATTCCAGACACAGTTCAGGAGGTTTTGGAAAAGTCTATAAGGGAATTTTTAGCGATGGAACCATTGTAGCGGTAAAGGTTCTACAAGGGCTTTCTGACAAGAAAATGGAGGAGCAGTTTATGGCTGAAGTGGGGACAATTGGCAAGACTCATCATTTCAATCTGGTTCGGCTCTACGGATTTTGCTTCGAAAGAAACATGATAGCACTGGTTTATGAATTCATGGGGAATGGCTCTCTTGACAAGTATTTGTTTCATGAAAAAGAAGACCTTAAGATTTGA 2121 0.4785 MEWDSNSDLSDDEAVSFMLNDDDDDAVGPLPFPVLQTAPCGFVVTDAVEPDHPIIYVNAVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRRCLDEGVEFQDEITHVIGIQFFTEANIDLGPLPGSTIKESTKSSDRFHSVLSSLNPVPVGDRNVTRGICGIFQLSDEVLSLKILARLTPRDIASVGSVCRHLYELTKNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGALRFRSSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVMGGQTGEEWMLSELHELSLASGKVAALVVISILIWSMPENASDSSSASYSRHSSGGFGKVYKGIFSDGTIVAVKVLQGLSDKKMEEQFMAEVGTIGKTHHFNLVRLYGFCFERNMIALVYEFMGNGSLDKYLFHEKEDLKI 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00503 706 Pfam PAS domain 39 119 IPR000014 -
Gma09g00503 706 ProSiteProfiles PAS repeat profile. 34 109 IPR000014 -
Gma09g00503 706 Gene3D - 409 622 IPR015915 GO:0005515
Gma09g00503 706 Pfam Kelch motif 427 478 IPR011498 GO:0005515
Gma09g00503 706 Pfam Kelch motif 497 544 IPR011498 GO:0005515
Gma09g00503 706 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 114 587 - -
Gma09g00503 706 Pfam Protein tyrosine and serine/threonine kinase 619 704 IPR001245 GO:0004672|GO:0006468
Gma09g00503 706 Pfam Galactose oxidase, central domain 332 381 - -
Gma09g00503 706 ProSiteProfiles Protein kinase domain profile. 611 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00503 706 PANTHER ADAGIO PROTEIN 1-LIKE 114 587 - -
Gma09g00503 706 PANTHER ADAGIO PROTEIN 1-LIKE 1 115 - -
Gma09g00503 706 SUPERFAMILY PYP-like sensor domain (PAS domain) 35 118 IPR035965 -
Gma09g00503 706 Gene3D Phosphorylase Kinase; domain 1 623 689 - -
Gma09g00503 706 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 1 115 - -
Gma09g00503 706 Gene3D PAS domain 33 120 - -
Gma09g00503 706 Pfam F-box-like 182 220 IPR001810 GO:0005515
Gma09g00503 706 CDD PAS 38 120 IPR000014 -
Gma09g00503 706 Pfam Galactose oxidase, central domain 270 320 - -
Gma09g00503 706 Gene3D - 172 218 - -
Gma09g00503 706 Gene3D - 249 401 IPR015915 GO:0005515
Gma09g00503 706 SUPERFAMILY Protein kinase-like (PK-like) 619 701 IPR011009 -
Gma09g00503 706 SUPERFAMILY Galactose oxidase, central domain 257 574 IPR011043 -
Gma09g00503 706 SUPERFAMILY F-box domain 166 235 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00503 Gma-Chr9 5122315 5135083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00503 581 698 Receptor kinase-like Gene Family AT1G66980 41.525 6.52e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma09g00503 PK_Tyr_Ser-Thr 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00503 K12115 - gmx:100805523 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01512 15 14026659 14034832 Gma09g00503 09 5122315 5135083 GST