Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00501 ATGGACAAATTTCTGAGCAATATGGAAAGAGAAAAGCCAATCAGGTTTACCGAAAAGCAGCTCGGGATTGCAACTGATAACTACTCTACATTGTTGGGATCAGGAGGTTTTGGAGAAGTTTATAAAGGAAACTTAAGTGATGGAACCACTGTGGGTGTGAAGGTTTTACGTGGGAATTCTGACAAGAGaattgaggaacagtttatggcagaagtgggtacaattggaaaaattCATCATCTCAATCTAGTTCAGTTGTATGGGTTTTGCTTTGAAAGAGATCTCAGAGCACTGGTTTATGAGTACATGGCAAATGGATCACTTGACAGGTATTTGTTCCGTAAAAAGAAGACCTTAGGATATGAAAAGCTTTATGCGATTGCAGTTGGGACAGCAAGAGGCATCGCGTACTTGCATGAAGATTGCAAACAAAGAATAATCCACTATGACATCAAACCAGGAAATATTCTTTTGGACAGCAACTTCAATCCTAAAGTTGCTGATtttggattggccaggctttgcagcagggacaatactcacataactatGACAGGTGGTAGGGGAACTCCCGGTTATGCTGCACCTGAGCTTTGGCTGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGCAGGAGAAGAAACCTTGACATTAACCTTCCAGAAAGCCAGGAGTGGTTCCCAGTATGGGTTTGGAAAAGATTTGGTGCTGGAGACTTGGCGGAGTTAATGACGGCTTGTGGAATAGAGGAGGGGCATAATTAA 798 0.3722 MDKFLSNMEREKPIRFTEKQLGIATDNYSTLLGSGGFGEVYKGNLSDGTTVGVKVLRGNSDKRIEEQFMAEVGTIGKIHHLNLVQLYGFCFERDLRALVYEYMANGSLDRYLFRKKKTLGYEKLYAIAVGTARGIAYLHEDCKQRIIHYDIKPGNILLDSNFNPKVADFGLARLCSRDNTHITMTGGRGTPGYAAPELWLPFPVTHKCDVYSFGMLLFEIIGRRRNLDINLPESQEWFPVWVWKRFGAGDLAELMTACGIEEGHN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00501 265 PIRSF ILK 2 237 - -
Gma09g00501 265 Pfam Protein tyrosine and serine/threonine kinase 30 221 IPR001245 GO:0004672|GO:0006468
Gma09g00501 265 ProSiteProfiles Protein kinase domain profile. 26 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00501 265 SUPERFAMILY Protein kinase-like (PK-like) 8 253 IPR011009 -
Gma09g00501 265 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 263 IPR045874 GO:0004672
Gma09g00501 265 SMART serkin_6 26 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00501 265 Gene3D Transferase(Phosphotransferase) domain 1 103 262 - -
Gma09g00501 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Gma09g00501 265 Gene3D Phosphorylase Kinase; domain 1 3 102 - -
Gma09g00501 265 PANTHER PUTATIVE-RELATED 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00501 Gma-Chr9 5116204 5117001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00501 16 250 Receptor kinase-like Gene Family AT5G39030 46.473 2.79e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma09g00501 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00501 - - gmx:100776445 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01506 15 13979285 13980846 Gma09g00501 09 5116204 5117001 GST