Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00500 ATGTCAACAAGCACTGACGATGGTGCTTCAGTTGGGGCTGTAGTTGTCATCGTTCTGGTGATTGCAGTGAAGGTAGGAATTTTGATTTGTGTGTGCCGAAGAAGAAATCAGACAGATAGCAGACCAGTAATTCCAGGTTCAAAATTTCTGACACTGGCTATTGATAAATTTCTGAATGACATGGAAAGAGAGAAGCCAATCAGGTTCACTGATCAACAGCTAAGGATTGCAACTGATAACTACTCTAACTTGTTGGGATCAGGAGGTTTTGGAACAGTTTATAAAGGAATTTTTACTAATGGGACCATGGTTGCTGTAAAAGTTCTACGTGGATCTTCAAACAAGAAAATCGAGGAGCAGTTTATGGCAGAAGTTGGCACAATTGGCAGAATTCATCATTTCAATCTTGTTCGGCTCTACGGATTTTGCTTTGAGAACAACTTGATAGCACTGGTTTATGAGTACATGGGAAATGGCTCTCTTGATAAGTATTTGTTCCATGAAAAGAAGACCTTAGGATATGAAAAGCTTCATGATATTGCAGTTGGGACAGCCAGAGGCATTGCTtatttgcatgaagagagaAGAAACCTTGATATTAAACTCGCTGAAAGCCAAGAGTGGTTTCCAACATGGGTTTGGAAAAAAATTGATACTGGACAACTGGGGGAGTTAATGATAGTTTGTGAGATAGAGGAGAGAAGTAAGGAGATTGCAGAAAGAATGATTAAGATAGCTTTGTGGTGTGTTCAATATAGGCAAGAATTAAGGCCCATAATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCACTGGAAGTTCCAGAACCTGGGAATCCATTTCAGCACTTGATGGGTGCGGTTACCGTTGCTCATCCAGTCCAAGAGTCAAAGACGTATAATACAACAACCATTTCATCTGGGTCTTCTGTTATAGTAACAGACTCCAGCGTTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCCTCTAGTAATGTATGA 1011 0.3966 MSTSTDDGASVGAVVVIVLVIAVKVGILICVCRRRNQTDSRPVIPGSKFLTLAIDKFLNDMEREKPIRFTDQQLRIATDNYSNLLGSGGFGTVYKGIFTNGTMVAVKVLRGSSNKKIEEQFMAEVGTIGRIHHFNLVRLYGFCFENNLIALVYEYMGNGSLDKYLFHEKKTLGYEKLHDIAVGTARGIAYLHEERRNLDIKLAESQEWFPTWVWKKIDTGQLGELMIVCEIEERSKEIAERMIKIALWCVQYRQELRPIMSVVVKMLEGSLEVPEPGNPFQHLMGAVTVAHPVQESKTYNTTTISSGSSVIVTDSSVVCATPIMRKYEIELASSNV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00500 336 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Gma09g00500 336 Pfam Protein tyrosine and serine/threonine kinase 83 194 IPR001245 GO:0004672|GO:0006468
Gma09g00500 336 Gene3D Transferase(Phosphotransferase) domain 1 200 279 - -
Gma09g00500 336 SUPERFAMILY Protein kinase-like (PK-like) 63 194 IPR011009 -
Gma09g00500 336 Gene3D Transferase(Phosphotransferase) domain 1 75 199 - -
Gma09g00500 336 PANTHER PUTATIVE-RELATED 9 194 - -
Gma09g00500 336 PANTHER PUTATIVE-RELATED 195 333 - -
Gma09g00500 336 ProSiteProfiles Protein kinase domain profile. 79 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00500 336 PANTHER RUST RESISTANCE KINASE LR10-RELATED 195 333 IPR045874 GO:0004672
Gma09g00500 336 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 194 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00500 Gma-Chr9 5112000 5113373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00500 13 194 Receptor kinase-like Gene Family AT1G56120 40.541 4.39e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma09g00500 PK_Tyr_Ser-Thr 3.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00500 - - gmx:100816921 402.905