Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00499 ATGCATTTTCTGACTCTCGCTATGGACAAATTTCTGAGTAATGTGGAAAGAGAAAAGCCAATCAGGTTTACTAGTGAGCAGCTCAGGATTGCAACTGATAACTACGCTTCAATATTGGGATCAGAAGGTTTTGGAGAAGTTTATACAGGAAATTTGAGTTTACGTGGGAACACTGTGGCTGTGAAGGTTTTACGTGGGAACTCAAATAAGAGAATTGAGGAACAGTTTATGGCACAAATGGGTACAATTGGAAAAGTTCATCATTTCAATCTAGTTCAGTTGTATGGATTTTGCTTTGAAAGAGACCTAAGAGCACTGGTTTATGAGTATATGGCGAATGGCTCTCTTGACAGGCATCTGTTTCATGAAAACAAGACACTTGGATATGAAAAGCTTTATGAGATTGCAGTTGGGACAGCCAGAGGCATCGCATACTTGTGCGAAGATTGCAAACAAAGAATAATCCATTATGACATCAAACCGGGAAATATTCTATTGGACAGCAATTTCAATCCTAAAGTTGCTGATTTTGGATTAGCCAAGCTTTGCAATAGGGACAATACTCGTATAACCATTACAGGAGGTAGGCAGGAGAAAAACCTTGACATTAACCTTCCAGAGAGCCAGGAGTGGTTTCCAGTATGGGTGTCGAAAAGATTTGATACTGGAGAATTTTCAGAGTTACTAACTGCATGTGGAATAGAAAAGAGACATCAGGAAATGGCTGAAAGAATGGTTAAGGTAGCATTGTTATGTGTTCAGTATAGGCCAGAATCAAGACCGATAATGAGTGATGTAGTGAAAATGTTGGAAATTTATAAACCTTTGAACCCATTTCAGCATATGATGGATGGCACCTTCCCTGGTGATTTAGTCCAAGCATCACGGACTGATCCTAGTTCAAGTGTTAATTCTAGCTCTTCTGTTATGCTGAAAAAGCTTCTTCGTCATTACCAACCTCCTACAAACATATTAACCATAGCATATGCAGCAATCATGGCCAAGAACCTTTGCTCTCTATATTCCATTCTCCTCCTCTTACTAACATTAGGAGATCTGATGGCTACGGTGGTTGGTGATAGGTGTAAGACAGATTTGGGGGTTTGCCCAGCAAAAAATGGTTGTAAGGCGAAGTGCTCTAAAATTCATGAAGGTGGTCAGGGAATTTGCGAGAACAATCATTGA 1185 0.3992 MHFLTLAMDKFLSNVEREKPIRFTSEQLRIATDNYASILGSEGFGEVYTGNLSLRGNTVAVKVLRGNSNKRIEEQFMAQMGTIGKVHHFNLVQLYGFCFERDLRALVYEYMANGSLDRHLFHENKTLGYEKLYEIAVGTARGIAYLCEDCKQRIIHYDIKPGNILLDSNFNPKVADFGLAKLCNRDNTRITITGGRQEKNLDINLPESQEWFPVWVSKRFDTGEFSELLTACGIEKRHQEMAERMVKVALLCVQYRPESRPIMSDVVKMLEIYKPLNPFQHMMDGTFPGDLVQASRTDPSSSVNSSSSVMLKKLLRHYQPPTNILTIAYAAIMAKNLCSLYSILLLLLTLGDLMATVVGDRCKTDLGVCPAKNGCKAKCSKIHEGGQGICENNH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00499 394 Gene3D Transferase(Phosphotransferase) domain 1 111 198 - -
Gma09g00499 394 Gene3D Transferase(Phosphotransferase) domain 1 199 281 - -
Gma09g00499 394 PANTHER PUTATIVE-RELATED 199 271 - -
Gma09g00499 394 PANTHER PUTATIVE-RELATED 2 196 - -
Gma09g00499 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Gma09g00499 394 Gene3D Phosphorylase Kinase; domain 1 8 110 - -
Gma09g00499 394 PANTHER RUST RESISTANCE KINASE LR10-RELATED 199 271 IPR045874 GO:0004672
Gma09g00499 394 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Gma09g00499 394 SMART serkin_6 33 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00499 394 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 196 IPR045874 GO:0004672
Gma09g00499 394 ProSiteProfiles Protein kinase domain profile. 33 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00499 394 Pfam Protein tyrosine and serine/threonine kinase 37 189 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00499 Gma-Chr9 5107631 5110735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00499 22 297 Receptor kinase-like Gene Family AT5G38280 33.951 1.88e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma09g00499 PK_Tyr_Ser-Thr 9.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00499 - - gmx:100776445 492.656