Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00497 ATGGTTGAAAATATCAAGAGAAGTAGCTTTGAAGTGTTGGGAATGTGCTGTGCTACAGAAGAAGCACTGGTTGAAAGAATTTTGAAGCCTCTTCGTGGAGTCAAAGACGTCTCAGTGATAGTCCCTACAAGAACAGTCACTGTGGTCCATGATGTTCTCTTGATTTCTGAGTCACAAATAGCCGATGCACTGAATGCTGCAAGGCTTGAAGCTAGTTTGAGACTACAGGGAGAGACTGATAATGAAAAGAAATGGCCAGATTTAACTACGATGGTGTGTGGCTTGTTACTAGCACTTTCTTTCTTGAAGTATGCATATCAACCTTTGGGATGGTTGGCACTTGGTTCTGTTGTCATTGGCTTCCCTAAGGTTCTACTCAGGGCCATAGCTTCCATAAAGGCTCTTACTCTTAATATCAACATTCTGGTTCTATTGGCTGTGTGTGGTACTGCTGCTTTACAAGATTTTTGGGAGGCTGGAATCATCATATTCCTATTCTCCATTGCTCAATGGCTTGAGACAAGAGCAACTCACAAGGCAATGGTTGCTATGTCCTCTTTAACAAGCATGGCTCCTCAAAAGGCCGTTATTGCTGAAACTGGGGAACTTGTTGACGTCAATGATGTTAAGATCAACACTATACTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAAATGTTAACAGGAGAATCATTACCTGTGACCAAGGAGTTAGATTCAGTAGTATGGGCTGGAACTATTAATGTGAATGGATATATAAGTGTAAAAACTACTGTTTTGGCAAAAGACACAGTGGTGGCTAGAATGTCAAAACTTGTTGAAGAAGCTTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATCATTTTGCGAAGTACTATATTCCTGCTGTCGTCTTGATTTCTGCTAGCATTGCTGTGGTTCCAGCTGCATTAAAAGTTCCTAATATTAAACCTTGGTTTCATCTGGCAATTGTGGTTTTATTGAGTGCATGCCCTTGTGCTCTCATCCTCTCCACACCTGTTGCAATCTTTTGTGCTCTCACAAAAGCAGCAATAAGTGGATTACTATTGAAAGGTGGAGATTATATTGAAACACTTTCTGGAATTAAGACAGTTGCTTTTGATAAAACGGGCACAATAACAAGAGGAGAGTTCACTGTGACAGATTTTTCTGTTTCTGTAGATGACATTAGCATTGAAACTTTACTGTACTGGGTTTCAAGTGTTGAGAGTAAATCAAGTCATCCTATGGCAGCTGCACTAGTGGAATATGGAATGTTGAATTCTGTCAAGCCAATCCCTGAAAATGTGGAGAATTTTCAAAATTTTCCAGGGGAAGGAGTTTATGGTATAATTAATGGGAAGGATATCTATATAGGCAATAGGAGAATCGGTGCTAGAGCTGGCTCTGAAAGAGTTGATTGTCGCACGCAATGTCAAAGCCCTGAAATTTCTACCCCGAATCAATGCTGTGGACCAACTCTGGTTGGAGTCTTCAGGTTAGCTGATACATGCAGATCAGGGGCATTGGAGGCAATAGAAGAGCTAAAGTTGTTAGGTGTGAGATCAGTCATGCTAACTGGAGATAGCTCTCAGGCTGCTATGTATGCTCAGAGTCAGTTGAACCATGCTCTAGACATTGTTCATGCAGAGCTTCTACCTGCAGAAAAGGCAGTGATCATTGAGAATTTCAAGAAAGATGGGCTAATAGCCATGATTGGAGATGGCATGAATGATGCTCCTGCATTAGCCACAGCTGACATCGGTATCTCAATGGGAATATCAGGTTCAGCTCTTGCAAATGAAACAGGCAATGCAATTCTCATGTCGAATGACATACGGAAAATACCTGAAGCCATTCGACTAGCAAGAAAAACTACTAGAAAGCTAATTGAGAATGTCATTATTTCAATTGGCTTCAAGAGTGTCATACTTGCATTGGCAATTGCAGGATACCCTATAGTCTGGCTTGCTGTGTTGACTGATGTTGGGACCTGTCTACTTGTTATTCTCAATAGCATGTTAATTTTACAGGAGAAAACTAAATATGAAAGAAAATCTACAAGTTCCAAATACGGAACTTTCTCGGAAGATATGACCACAGCTCTACTTGACAAGAAAAGTAATAGCAATGAGAACAAAGCAGTTCTCTCCGCTGAAAAGTGTGGTAAAGATTGTTGTAAAAACGACACTTATCGTGAAGCAACTACAAACAAGAATGAATCTTCTGGACTTTCAAAGTTGAGCTCACTGAAGGGAAACCACAATGGGAACTTGGTATCTATCGAAGTGCACATTGTGAAACCTTGCAATGGTTGTGGTCTAGGCAAAGTCAAAATGTGTGAGGACTTCTCATGCAGAACAAATAATAGTAGCTCTGATTGTTGCCAAGAGCAATCTAAGACTGAGAAAAGTGACACTGGTTCTATTGTTACACAAGAAGCTAGCATTGCCACATTAGAGTCTGATGGCTATAAGGGCAAGTCTATGGATATTTCAAAGTTGTCTGGGACAAGTGTGACTCCCAAGTGTTGCAAGAACTTGTGCTGTAATGATAGTGTTAACAATATTAGTAACCTTAGCCTTAGCCAGCCCGAAATTGTTATCGAGTGA 2658 0.4063 MVENIKRSSFEVLGMCCATEEALVERILKPLRGVKDVSVIVPTRTVTVVHDVLLISESQIADALNAARLEASLRLQGETDNEKKWPDLTTMVCGLLLALSFLKYAYQPLGWLALGSVVIGFPKVLLRAIASIKALTLNINILVLLAVCGTAALQDFWEAGIIIFLFSIAQWLETRATHKAMVAMSSLTSMAPQKAVIAETGELVDVNDVKINTILAVKAGDAIPLDGIVVEGKCEVDEKMLTGESLPVTKELDSVVWAGTINVNGYISVKTTVLAKDTVVARMSKLVEEASSRKSRTQRFIDHFAKYYIPAVVLISASIAVVPAALKVPNIKPWFHLAIVVLLSACPCALILSTPVAIFCALTKAAISGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFTVTDFSVSVDDISIETLLYWVSSVESKSSHPMAAALVEYGMLNSVKPIPENVENFQNFPGEGVYGIINGKDIYIGNRRIGARAGSERVDCRTQCQSPEISTPNQCCGPTLVGVFRLADTCRSGALEAIEELKLLGVRSVMLTGDSSQAAMYAQSQLNHALDIVHAELLPAEKAVIIENFKKDGLIAMIGDGMNDAPALATADIGISMGISGSALANETGNAILMSNDIRKIPEAIRLARKTTRKLIENVIISIGFKSVILALAIAGYPIVWLAVLTDVGTCLLVILNSMLILQEKTKYERKSTSSKYGTFSEDMTTALLDKKSNSNENKAVLSAEKCGKDCCKNDTYREATTNKNESSGLSKLSSLKGNHNGNLVSIEVHIVKPCNGCGLGKVKMCEDFSCRTNNSSSDCCQEQSKTEKSDTGSIVTQEASIATLESDGYKGKSMDISKLSGTSVTPKCCKNLCCNDSVNNISNLSLSQPEIVIE 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00497 885 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 162 669 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g00497 885 SFLD p-type atpase 371 641 IPR044492 -
Gma09g00497 885 SUPERFAMILY Calcium ATPase, transduction domain A 202 287 IPR008250 -
Gma09g00497 885 Gene3D - 379 639 IPR023214 -
Gma09g00497 885 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 690 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma09g00497 885 Gene3D - 1 75 - -
Gma09g00497 885 ProSitePatterns Hypothetical cof family signature 2. 588 610 - -
Gma09g00497 885 SUPERFAMILY HAD-like 386 689 IPR036412 -
Gma09g00497 885 CDD P-type_ATPase_HM 90 690 - -
Gma09g00497 885 Gene3D - 399 520 IPR023299 GO:0000166
Gma09g00497 885 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Gma09g00497 885 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Gma09g00497 885 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 820 - -
Gma09g00497 885 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Gma09g00497 885 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Gma09g00497 885 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 820 - -
Gma09g00497 885 Gene3D - 177 291 - -
Gma09g00497 885 Pfam Heavy-metal-associated domain 10 63 IPR006121 GO:0046872
Gma09g00497 885 Pfam haloacid dehalogenase-like hydrolase 384 602 - -
Gma09g00497 885 SFLD C1.7: P-type atpase like 371 641 - -
Gma09g00497 885 Pfam E1-E2 ATPase 198 366 - -
Gma09g00497 885 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Gma09g00497 885 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Gma09g00497 885 PRINTS P-type cation-transporting ATPase superfamily signature 534 544 - -
Gma09g00497 885 PRINTS P-type cation-transporting ATPase superfamily signature 588 607 - -
Gma09g00497 885 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Gma09g00497 885 CDD HMA 10 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00497 Gma-Chr9 5055661 5062815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00497 3 761 Primary Pumps ATPases AT4G30110 56.868 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00497 K01534 - gmx:100815324 1713.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01502 15 13935662 13937588 Gma09g00497 09 5055661 5062815 GST