Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00496 ATGAAGTATATTAGGAGCAACAGCTTGAAGAGGCTCTTCTCGTTTGGAAGACGCGGTTTTGGGGAGGAAAACGATGTAGGGTTGGTGGTTTCTCCTTGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTATTTGATGCCACCAATGACTTTAGCTCAGAGAATGTGATTGGGAGAGGAGGGTATGCAGAGGTTTATAAGGGAACATTGAATGGTGGTGATGAAGTTGCGGTGAAGAGGCTCACAAGAACTTCAACGGATGAAAGGAAGGAGAAGGAGTTTCTGTTAGAGATTGGAACCATTGGTCACGTGCGCCATTCCAACGTGTTGCCTCTTCTTGGGTGTTGCATTGACAATGGACTTTACCTGGTTTTTGAGCTATCCACTGTTGGTTCTGTTGCTTCTCTTATTCATGATGAGAACTTGCCTCCTTTGGATTGGAAAACAAGGTATAAGATAGCTCTAGGCACTGCACGTGGCCTTCACTACTTGCACAAAGGCTGCAAGAGGAGGATCATTCATAGGGACATCAAGGCCTCAAACATTTTGTTAACTGCAGATTTTGAACCGAAGATATCTGATTTTGGACTTGCAAGGTGGCTTCCCTCTCAGTGGACTCACCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTGGCACCTGAGTACTACTTGCATGGAGTAGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAGTCATCTCTGGGAGGAAACCAGTGGATGGGTCTCACCAAAGCTTGCACAGCTGGGCTAAACCAATACTAAGCAAAGGGGAGATAGAAAATTTGGTAGATCCAAGGCTTGGAGGGGCTTATGACGTGACACAGTTTAATAGAGTAGCCTTTGCTGCCTCCCTTTGCATTAGGGCATCTGCAACTTGCAGACCTATCATGAGTGAGGTACTGGAGGTAATGGAGGAGTGGGAGATGGATAAAGGGAAGTGGGAAATGCCAGAGGAAGAAGAGCAAGAGGAGGAATTATGGGGTTTTGAGGATCTGGAATATGAATATGACAGTTCCTTTTCAATGTCACTACCAGACTCTGTTGGAAGTACTTAG 1116 0.4534 MKYIRSNSLKRLFSFGRRGFGEENDVGLVVSPCEEHPPRPSWKCFSYEELFDATNDFSSENVIGRGGYAEVYKGTLNGGDEVAVKRLTRTSTDERKEKEFLLEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSTVGSVASLIHDENLPPLDWKTRYKIALGTARGLHYLHKGCKRRIIHRDIKASNILLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILSKGEIENLVDPRLGGAYDVTQFNRVAFAASLCIRASATCRPIMSEVLEVMEEWEMDKGKWEMPEEEEQEEELWGFEDLEYEYDSSFSMSLPDSVGST 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00496 371 PANTHER OS04G0654600 PROTEIN 29 352 - -
Gma09g00496 371 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Gma09g00496 371 SUPERFAMILY Protein kinase-like (PK-like) 35 326 IPR011009 -
Gma09g00496 371 Gene3D Phosphorylase Kinase; domain 1 32 133 - -
Gma09g00496 371 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00496 371 CDD STKc_IRAK 63 326 - -
Gma09g00496 371 PANTHER OS08G0249100 PROTEIN 29 352 - -
Gma09g00496 371 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g00496 371 Pfam Protein tyrosine and serine/threonine kinase 60 264 IPR001245 GO:0004672|GO:0006468
Gma09g00496 371 Gene3D Transferase(Phosphotransferase) domain 1 135 350 - -
Gma09g00496 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00496 Gma-Chr9 5045570 5050938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00496 41 360 Trihelix Transcription Factor Family AT5G38560 39.296 8.97e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma09g00496 PK_Tyr_Ser-Thr 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00496 - - gmx:100804983 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01501 15 13929312 13935540 Gma09g00496 09 5045570 5050938 GST
Gma17g00586 17 4871804 4877237 Gma09g00496 09 5045570 5050938 PCT
Gma13g00779 13 22036746 22041390 Gma09g00496 09 5045570 5050938 PCT
Gma09g00496 09 5045570 5050938 Gma17g00586 17 4871804 4877237 PCT
Gma09g00496 09 5045570 5050938 Gma13g00779 13 22036746 22041390 PCT