Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00479 ATGGAGGAGGCACATAAGGGGGATGAAGACAAAGAGAAAAGAGGGGAAGAAGTGAAATACCGCGGCGTGAGAAGGAGGCCATGGGGTAAGTTCGGAGCAGAGATCAGAGACCCAACGAAACCTACAGGAAGACAATGGTTAGGAACATTTGACACGGCGGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGGGGTGTTCTTGCAATCCTTAATTTTCCAGATGAGTGCTATTCTCAACTCCCTTTTGTATCATCAAACCCTACTAGTACGGCTAATGGAAGTTCTTTTGCTCCAACACATAAGGAAGTTATTGAGTTTGAGTGTTTGGATAACAAGGTGTTGGAAGACCTTCTTGAGTCCGAAGTGAAAAGAAGGAACGAAGACTAA 399 0.4486 MEEAHKGDEDKEKRGEEVKYRGVRRRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIELRGVLAILNFPDECYSQLPFVSSNPTSTANGSSFAPTHKEVIEFECLDNKVLEDLLESEVKRRNED 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00479 132 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Gma09g00479 132 PANTHER DNA-BINDING DOMAIN 1 126 IPR044808 GO:0003700|GO:0009873
Gma09g00479 132 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Gma09g00479 132 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Gma09g00479 132 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Gma09g00479 132 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Gma09g00479 132 PANTHER ETHYLENE RESPONSE FACTOR 1 126 - -
Gma09g00479 132 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Gma09g00479 132 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Gma09g00479 132 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00479 Gma-Chr9 4732661 4733059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00479 16 129 AP2-EREBP Transcription Factor Family AT3G23230 54.839 1.69e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma09g00479 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00479 - - gmx:100801981 254.218